Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4680 ATGTCACTCGCATCGTTCTCCATTATCCGCCACCACCGCACGGTGGCTACCGTCGTCCCTCAACTTCTCCGCCGATTCACTTCCATTTCCGCCAGACAACAAAACCCTAAGCACGATGCCCCAAGCAAGAATCTCCTGAAAGCAAAACACACATTGAAAAACTTCTCCTCTCTCGCTCCCATCCTATCCCGCGAAGAAAATCCTCCTCTCTCCGAATCTCAAGCCATCGGCGTCGTCGCTTCATCCCAAGCCAATTTCATGCGCGTAATCGTCCAACCAGAACATTCTGGAACCTTCCACGATTCTTCCGGAGGTTTGGAGCTTCTGTGCGTTGTGAGAGCTTTACTGAAGAAGATAAAACGTAGGGTTATGGTTGGTGATAAGGTTATAGTAGGTTCTGTTGATTGGGTGGATCGTAGGGGTATGATTGAAAACGTGTTTCAGAGAAATTCTGAAATTCTTGATCCTCCTGTGGCTAACGTAGATCATTTACTTGTTCTCTTTTCGCTTGATCAACCCAAGCTTGAGCCATTTACTCTTACAAGGTTCTTGGTGGAAGCTGAATCCACTGGGATTCCTTTCACTCTAGCGCTTAACAAGACTGAGCTTGTGGATAAAGAGGCCCTGGATTCTTGGAAGGCTAGGTTTCGTGACTGGGGATACCGGCCAATTTTTTGCAGCGTTGAATCCGGACATAACCTTGATCTTCTTGCGTTCCAATTGAAAGATCAAATAACAGTGCTTGTGGGTCCTAGTGGAGTTGGGAAGTCTAGTTTGATCAATGCCCTTCGAAGCAATCCTCGTACTTGTGATACTACAGATGGGGAGAATTGGTTTGAACCTATTTTAGGTAGCAAGTGGTTTGATGACCAACGAGTCGCAGAGGTTTCAACAAGAAGCGGCAGGGGGAAGCATACTACCCGTCATGTCTCTCTGCTTCCATTATCTGGAGGGGGTTATTTTGCCGATACTCCTGGATTTAACCAGCCTAGTTTGTTGAAAGTGACAAAGCAATCTCTTGCGCAAACGTTTCCTGAAATCAGGGAAATGCTTGGTGGAAATGAGCCTAAAACATGTTCATTCAACAATTGTTTGCATCTTGGTGAACCTGGCTGCATTGTAAAGGGGGATTGGGAAAGATATCCATTCTATTTTCAACTTCTTGATGAAATTAGAATCCGAGAGGAGTTTCAGTTGAGGACATTTGGAACTAAAAGAGAAAGCGATGTAAGGTTAAAAATAGGAAATATGGGTTCTAAGCAAGCAGAACCACGTTTGGAGCTTAAGAAGCATAGAAGACAATCTCGAAAGAAGACTAACCAATCTATTTTAGATTATCAGGATGATGACGACAATTTGCTTGACGAGGACAACGATCCCTTTTTAAATGCTACGAGGAATGAAAATCCTTAA 1413 0.4423 MSLASFSIIRHHRTVATVVPQLLRRFTSISARQQNPKHDAPSKNLLKAKHTLKNFSSLAPILSREENPPLSESQAIGVVASSQANFMRVIVQPEHSGTFHDSSGGLELLCVVRALLKKIKRRVMVGDKVIVGSVDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPFTLALNKTELVDKEALDSWKARFRDWGYRPIFCSVESGHNLDLLAFQLKDQITVLVGPSGVGKSSLINALRSNPRTCDTTDGENWFEPILGSKWFDDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYFADTPGFNQPSLLKVTKQSLAQTFPEIREMLGGNEPKTCSFNNCLHLGEPGCIVKGDWERYPFYFQLLDEIRIREEFQLRTFGTKRESDVRLKIGNMGSKQAEPRLELKKHRRQSRKKTNQSILDYQDDDDNLLDEDNDPFLNATRNENP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4680 470 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 75 395 IPR004881 GO:0003924|GO:0005525
Tpr2g4680 470 Gene3D - 70 146 IPR012340 -
Tpr2g4680 470 ProSiteProfiles EngC GTPase domain profile. 159 328 IPR010914 GO:0003924|GO:0005525
Tpr2g4680 470 Gene3D - 147 332 IPR027417 -
Tpr2g4680 470 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 63 452 - -
Tpr2g4680 470 MobiDBLite consensus disorder prediction 415 470 - -
Tpr2g4680 470 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 63 452 IPR004881 GO:0003924|GO:0005525
Tpr2g4680 470 Gene3D Probable gtpase engc; domain 3 334 396 - -
Tpr2g4680 470 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 123 266 IPR004881 GO:0003924|GO:0005525
Tpr2g4680 470 CDD YjeQ_EngC 159 389 IPR004881 GO:0003924|GO:0005525
Tpr2g4680 470 Pfam RsgA GTPase 146 332 IPR010914 GO:0003924|GO:0005525
Tpr2g4680 470 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 151 330 IPR030378 GO:0005525
Tpr2g4680 470 SUPERFAMILY Nucleic acid-binding proteins 75 149 IPR012340 -
Tpr2g4680 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 392 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4680 K06949 - gmx:100796145 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4680 2 52098617 52102586 Tpr2g4680 2 52098617 52102586 ECH