Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4679 ATGGATTGGCAAGGGCAAAGCCTAGCAGAGAAGTTAATGCAGATAATGTTGCTTGGATTTGCTGTGATTGCCTTTGGAACGGGATATCTTACGGCTTCTTTCCAGATGATGATCCTCATATATGCTGTTGGTGTCGTTCTCACCACATTGGTGACTGTCCCAAATTGGCCCGTTTTCAACCGCCATCCTCTTAAGTGGTTGGATCCAAGTGAGGTAGAAAAGCATCCAAAGCCACAACCATCGTCAAACGTGAATTCAAAGAAGAAACCCATTAAGAAGTAG 282 0.4433 MDWQGQSLAEKLMQIMLLGFAVIAFGTGYLTASFQMMILIYAVGVVLTTLVTVPNWPVFNRHPLKWLDPSEVEKHPKPQPSSNVNSKKKPIKK* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4679 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016021
Tpr2g4679 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 89 IPR009542 GO:0005787|GO:0006465|GO:0016021
Tpr2g4679 93 MobiDBLite consensus disorder prediction 70 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4679 Tpr-Chr2 52093920 52095834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4679 K12946 - gmx:100777545 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4679 2 52093920 52095834 Tpr2g4679 2 52093920 52095834 ECH
Tpr2g4679 2 52093920 52095834 Tpr3g1312 3 11616350 11617893 PCT