Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g4668 | ATGCAAACTAAGAAAAAAGCCTCTAGGCGGAACGGTAATCGAGAAGTCAATTCTCCTAGGGTTTCAAGAGCACAGAAGAAGGCCTCTGAAAATGGCCATGTGGCTGGCTTAATTACATCTTCTGCAAGAAAGATTAAACCTTCTTGCGCTCTTGAAGATAAAGCTAGAGAGCCAACGCCCCAAACTTTTTTGAATAACGAGTACAACACTGTGGACAAGGGGGTTTTCAGTACTAATCTGGGAAATGAAGCAGTTGATGGTGCTTCAGTAGATTTTGAGGGTTGTAACAAGCAAGGTGTACCTCTGGAGACTGGAACTATATTCTCTCCTGGGTTTCACTTATCCAAAGGTCCTGTAGGAAAAGTTGTTGACAGAGTTGATTTTGTCAAAATATTTCGGTGCGATGATCAACAAAGAATTTCTCTCGACCAAGAAGTAACACAAGGAGATGGCCATGTTAGTCACGATTCTGACTCTGCCATGGAAGTAGACATAAGCAATTCATCAAATGTGCTTGCTTTAAGCACAAAAACTGTTAATGGTTGCAATTCTGATTTTGATGGAAATGGTCTTTCCGTGGAAGTTCCTAACATGTATCTTTCCATGAAAAACTCAAAGCTGGAATGTGTTGACGAGCATGGTCAGGACTCTATATCCTCTGATATGTGCCCAGAGGATGATGAATTTGAGGACTTCGACGATTTTGACCCTTATTTATTCATAAAGACCTTACCAGACTTGTCAAAGGTTGTTCCCACATATAGACGGATGTTGCTACCTAAGCAGACTCGGAGCTGCCCTCCTATTACTCTTGTCCTGGACTTGGATGAAACTTTGGTGCATTCTTCCCTTGAACCTTGCGAGGATGTAGACTTTACTTTCACTGTGAATTTTAATTCCGAGGAGCACATTGTCTATCGGAAGATATTTCGCCATCGTGTATTCCGTGAATCCTGTGTTTATGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTCGGTCGTGATTTAGCACATGTTATAATAATTGACAACTCCCCACAGGCATTTGGGTTCCAAGTGGACAATGGAATACCAATTGAGAGTTGGTTTGATGATCCTTCAGATAGAGAATTGCTTTTATTGCTCCCTTTCTTGGAGAGTTTAGTAGGAGTTGATGATGTCCGGCCCAAAATTGCAAAAAGGTTCAAGCTCAGGGAGAAAATAGCTGCGGCTGTGCATCCTTTAAATACAAATAGAAGGGATTTCTTGTCTGAATAA | 1260 | 0.4143 | MQTKKKASRRNGNREVNSPRVSRAQKKASENGHVAGLITSSARKIKPSCALEDKAREPTPQTFLNNEYNTVDKGVFSTNLGNEAVDGASVDFEGCNKQGVPLETGTIFSPGFHLSKGPVGKVVDRVDFVKIFRCDDQQRISLDQEVTQGDGHVSHDSDSAMEVDISNSSNVLALSTKTVNGCNSDFDGNGLSVEVPNMYLSMKNSKLECVDEHGQDSISSDMCPEDDEFEDFDDFDPYLFIKTLPDLSKVVPTYRRMLLPKQTRSCPPITLVLDLDETLVHSSLEPCEDVDFTFTVNFNSEEHIVYRKIFRHRVFRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDPSDRELLLLLPFLESLVGVDDVRPKIAKRFKLREKIAAAVHPLNTNRRDFLSE* | 420 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g4668 | 419 | SMART | forpap2 | 267 | 370 | IPR004274 | - | |
| Tpr2g4668 | 419 | PANTHER | INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED | 307 | 405 | - | - | |
| Tpr2g4668 | 419 | PANTHER | INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED | 1 | 306 | - | - | |
| Tpr2g4668 | 419 | Gene3D | - | 306 | 404 | IPR023214 | - | |
| Tpr2g4668 | 419 | Gene3D | - | 248 | 305 | IPR023214 | - | |
| Tpr2g4668 | 419 | PANTHER | NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED | 1 | 306 | - | - | |
| Tpr2g4668 | 419 | PANTHER | NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED | 307 | 405 | - | - | |
| Tpr2g4668 | 419 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Tpr2g4668 | 419 | Pfam | NLI interacting factor-like phosphatase | 307 | 389 | IPR004274 | - | |
| Tpr2g4668 | 419 | ProSiteProfiles | FCP1 homology domain profile. | 191 | 382 | IPR004274 | - | |
| Tpr2g4668 | 419 | SUPERFAMILY | HAD-like | 258 | 393 | IPR036412 | - | |
| Tpr2g4668 | 419 | CDD | HAD_FCP1-like | 268 | 360 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr2g4668 | Tpr-Chr2 | 52024938 | 52030089 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g4668 | K17616 | K12778 | gmx:100798665 | 586.645 |