Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4658 ATGAAGCAAACACAGCAACATCAAATATTTATGTCTCTATGTGTTCTAGCTCTGATCATTGTTGTTTCCAATGGAGCTGAGGATCTGTCTCAAAAATGTGGACAAGTTGTTCAAAAAGTGATTCCATGTTTGGATTTTGCAACTGGAAAAGCTGATACTCCTAAGAAAGAATGTTGTGATGCTGCTAACAGTATTAAGGAAACAGATCCAGAGTGTTTGTGTTATATCATTCAACAGACACATAAGGGTAGCCCTGAAAGTAAGAGTATGGGTATTCAAGAAGATAAGCTTCTTCAACTTCCAACTGTTTGTCATGTCAAAGATGCCAACATAACCAATTGTCCCAAGCTTTTGGGTTTATCTCCAAGTTCCCCTGATGCAGCAATCTTCAAAAATGCATCAAAGATAAACCCTCCAACATCTTCATCATCTGCTTCATCAACTGGAACTACTGCAAAAACACCAACACCATCAAGTGGTTCATATAACCTTAGACCAGTTATGATGACCGAAGTGATGATGGTAACTTTGGCCATTGTTCTTGGTGCAGTAACTGTGAGCATTTAA 567 0.3845 MKQTQQHQIFMSLCVLALIIVVSNGAEDLSQKCGQVVQKVIPCLDFATGKADTPKKECCDAANSIKETDPECLCYIIQQTHKGSPESKSMGIQEDKLLQLPTVCHVKDANITNCPKLLGLSPSSPDAAIFKNASKINPPTSSSSASSTGTTAKTPTPSSGSYNLRPVMMTEVMMVTLAIVLGAVTVSI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4658 188 Pfam Probable lipid transfer 26 114 IPR016140 -
Tpr2g4658 188 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 11 181 - -
Tpr2g4658 188 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Tpr2g4658 188 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Tpr2g4658 188 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
Tpr2g4658 188 SMART aai_6 33 114 IPR016140 -
Tpr2g4658 188 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 11 181 IPR043325 -
Tpr2g4658 188 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 114 IPR036312 -
Tpr2g4658 188 MobiDBLite consensus disorder prediction 131 162 - -
Tpr2g4658 188 CDD AAI_LTSS 42 106 - -
Tpr2g4658 188 Gene3D - 30 111 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4658 1 181 Acyl Lipid Metabolism Gene Families AT1G27950 42.623 6.69e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4658 - - adu:107482371 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4658 2 51886220 51889515 Tpr2g4658 2 51886220 51889515 ECH
Tpr2g4658 2 51886220 51889515 Tpr2g4658 2 51886220 51889515 PCT