Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4656 ATGTCTCAGGTTGATAGCAGAAATTCTTCAGCTGTTAAGCGTGCCAGGACTGATGGTAGTCGCAGGGAAGATGATTGGACATGTCCCAGCTGTGGTAATGTCAATTTCTCTTTTAGGACAACCTGCAATATGCGTAACTGCACCCAACCGAGGCCCGCTGATCATAATTCGAAACCTGCTGTCAAGCCTCTACAAGCTCCACAGGCCTACTCAGCAGCAGCTCCTTATTTAGGCGCCAATCCTCCCCCCTCAATATATCTTGGTGTCCCACCATACGGTCCGTCTTTATTCAATGGATCACCTGTTCCTCCTCCCTATGAGGTTCCATTTTCTGGAGGATCAGCCTATCACTACAATTATGGAGGTCGTCTTTCTGCTGGCAGTCCGTATAGACCATTGCATCTATCAGCACCAGTACCATACACAAGTGGATCCATGGTGGGAAACGGTGGGATCTATGCCATGCCCCAGCTATTGGATCGCTATGGCCTCGGTGTCCCTATTGGACCTGGAGCAATGGGCACTAGGCCAGGATTTTTTCGCGATGACAAGTCTCAGAAAAAGGGAGCCGATTCAACTCGTGACAATGATTGGGCATGTCCAAAATGTGGCAACGTCAATTTCTCATTTAGAACTGTTTGTAACATGAGAAAGTGCAACACTCCCAAACCTGGGTCTCAGGCCTCAAAGTCTGACAAGAACTCTAAGCAAAAGATGCCCGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATAAATTACCCGTTCCGAACAAAGTGCAACAGACAGAACTGTGGTGCTGACAAGCCAGCTGATTCGGAAAAATCTCCCTCATCATCTCCAGATCAAAATGATCAGTGA 861 0.475 MSQVDSRNSSAVKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKPAVKPLQAPQAYSAAAPYLGANPPPSIYLGVPPYGPSLFNGSPVPPPYEVPFSGGSAYHYNYGGRLSAGSPYRPLHLSAPVPYTSGSMVGNGGIYAMPQLLDRYGLGVPIGPGAMGTRPGFFRDDKSQKKGADSTRDNDWACPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSSPDQNDQ* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4656 286 Gene3D - 229 272 - -
Tpr2g4656 286 Gene3D - 187 226 - -
Tpr2g4656 286 Gene3D - 14 54 - -
Tpr2g4656 286 MobiDBLite consensus disorder prediction 1 25 - -
Tpr2g4656 286 Pfam Zn-finger in Ran binding protein and others 195 224 IPR001876 -
Tpr2g4656 286 Pfam Zn-finger in Ran binding protein and others 240 270 IPR001876 -
Tpr2g4656 286 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Tpr2g4656 286 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
Tpr2g4656 286 PANTHER OS08G0521400 PROTEIN 5 277 - -
Tpr2g4656 286 MobiDBLite consensus disorder prediction 180 194 - -
Tpr2g4656 286 SMART zf_4 242 268 IPR001876 -
Tpr2g4656 286 SMART zf_4 196 222 IPR001876 -
Tpr2g4656 286 SMART zf_4 24 50 IPR001876 -
Tpr2g4656 286 MobiDBLite consensus disorder prediction 175 194 - -
Tpr2g4656 286 MobiDBLite consensus disorder prediction 221 243 - -
Tpr2g4656 286 MobiDBLite consensus disorder prediction 266 286 - -
Tpr2g4656 286 MobiDBLite consensus disorder prediction 11 25 - -
Tpr2g4656 286 PANTHER ZINC FINGER PROTEIN 5 277 - -
Tpr2g4656 286 SUPERFAMILY Ran binding protein zinc finger-like 189 226 IPR036443 -
Tpr2g4656 286 SUPERFAMILY Ran binding protein zinc finger-like 234 272 IPR036443 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4656 181 273 EF-hand Containing Proteins AT1G55040 33.333 3.09e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4656 - - gmx:100796535 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4656 2 51868104 51871669 Tpr2g4656 2 51868104 51871669 ECH