Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4649 ATGTTTAACTGGGGGTCCATTGTTGTAACTGTGATGCTATTTGTGCTATTGACACCAGGGCTGCTATTTCAAGTTCCAGGGCGTTCAAGATGCATTGAGTTTGGAAACTTTCAAACAAGTGCTGCTGCCATTGTTGTTCATTCTCTTCTCTACTTTGGTCTTGTTTGTCTTTTCTTGATCGCCGTTAAGGTCCATTTTTACATAGAAGTCAAACAGTGTCTATTGTCAAATACTATATATATATGTGTTATAATTTGTGAAATAGCTAGGAAAAAAATTAAGTATAGAAGTATGGCAGATTGGGGTCCAGTGGTGATAGCAGTGGTGCTGTTTGTGTTACTAAGTCCAGGATTGTTGTTTCAAGTTCCAGGAAGAAACAAAGTGGTGGAGTTTGGAAACATGCACACTAGTGGTGTGTCTATTTTGGTTCATACTATCATCTTTTTTGGATTAATTACCATCTTTCTTATTGCAATTGGTGTTCATATCAACACTGGCTAA 501 0.3733 MFNWGSIVVTVMLFVLLTPGLLFQVPGRSRCIEFGNFQTSAAAIVVHSLLYFGLVCLFLIAVKVHFYIEVKQCLLSNTIYICVIICEIARKKIKYRSMADWGPVVIAVVLFVLLSPGLLFQVPGRNKVVEFGNMHTSGVSILVHTIIFFGLITIFLIAIGVHINTG* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4649 166 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
Tpr2g4649 166 Pfam Protein of unknown function (DUF3339) 98 163 IPR021775 -
Tpr2g4649 166 PANTHER OS05G0103400 PROTEIN 1 68 IPR021775 -
Tpr2g4649 166 PANTHER OS05G0103400 PROTEIN 98 165 IPR021775 -
Tpr2g4649 166 PANTHER PROTEIN, PUTATIVE-RELATED 98 165 - -
Tpr2g4649 166 PANTHER PROTEIN, PUTATIVE-RELATED 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4649 Tpr-Chr2 51756042 51759413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4649 - - pvy:116131216 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4649 2 51756042 51759413 Tpr3g1298 3 11471557 11472005 PCT