Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4638 ATGAAGCATTTCATGCTTCCAAGAAACGCAACCGCAAGAGACGCCGCAGAGCTTCCATCTTCATCAAGTCCTAGCAGCTCCGCCAAATCTAGACCCACTCGTAAACACAGCCAAACCAAAGAAAACTCAGATCCAAATTGCACCGTCACTTCTTCCCCTTCCCATGTCAAATTGAAAAGTCCATTACCACCAAGACCTCCATCTTCCAATCCTCTCAAACGCAAGCTCGCTCTTGATACTCTCGCCGCCGATAATTCACTCCCGGCAACTTCCGATTCCGGTGTCAAGGTTATTGTGAGGATGAGACCGTTGCGCAACGATAAGGACGAAGGAGATCCTATTGTTCAGAAGATCTCCGGTGATTCTTTAACCATTAATGGCCACAGTTTTACCTTTGATTCTGTTGCTGATGTTGATTCTACTCAGCTTGATATTTTTGAACATGTTGGGGTTCCTCTGGTTGAGAATTGTTTGGCTGGTTTCAATAGTTCCGTCTTTGCTTATGGACAGACGGGGAGTGGGAAGACTTTTACAATGTGGGGTCCGGCCAATTCTTTGTCTGAAGAAAATGTAGCAAAGGAGCAACAAGGACTAACACCGCGAGTTTTTGAGCGACTATTTGCACGTATAAATGAAGAGCAAATTAAGAACTCTGATCAACAGCTCAATTATCAGTGCCACTGCTCTTTTCTCGAGATATATAATGAGCAAATCACAGATCTGTTTGATCCAAATCAAAAGAACCTTCAGATTAGAGAAGATGTCAAATCAGGTGTTTATGTTGAAAATCTTACAGAGGAGCAGGTGTCTACAATGAAGGATGTTACTCAGCTTTTACTGAAGGGATTATCAAACAGGAGAATAGGTGCAACCAGTATAAATTCTGAAAGTTCCCGCTCTCACACTGTTTTTACTTGTGTTGTTGAGTCCCGATGCAAGAGTGCAGCAGACGGTGTGAGCAGATTAAAAACAAGTAGAATCAATCTTGTTGATCTGGCTGGGTCAGAACGACAAAAATCAACAGGTGCTGCCGGAGAGCGTTTGAAGGAGGCTGGCAATATTAATAGATCACTCTCACAGCTTGGGAATTTGATAAACATTCTTGCTGAGGTCTCTCAAACAGGAAAGCAGCGGCACATACCATACAGAGATTCCAGGTTGACATTTTTGTTGCAGGAGTCTCTTGGAGGAAATGCTAAATTAGCAATGGTTTGTGCTATATCACCGGCACAAAGTTGTAGGAGTGAGACCTTCAGTACATTGAGATTCGCACAACGTGCCAAAGCCATCAAGAACAAGGCAGTTGTTAATGAAGTTATGCAGGATAATGTGAACCACTTGCGCCAAGTGATACGACAACTCAGGGATGAACTGCATCGAATTAAAGAAAATGGTTACAATCCAATGGACCCAAGTGGAGGTCATTCAGCAGCTTGGGTTCGAAAAAGCTTGAACATATTACAGTCTAGCCTCAATAGACCGCCACCATTATGCCGTGTCGATGAAGATGGTGATGAGGAGATGGAGATTGACGAGGAAGAGGTTGAAGACCAGGATCAAGTAAATTTTGCATCAGAAAATGGCAACAAAATGGACACTGATGATCAAGATTTTGCCCAACCGTGTGAGGAGAAAAATAATGTCTCTGCTGGCACTAAATTTCTAAATGAAGAATCATCCTGTCCTGTGGGTGAACCTGACAGTGGAGATTTCTCCGGTTTTTCAGCCTCAGACCCGTCCGGTGATTCACCCAGTGCCACAGTGAACTGTGTCTCACCCGGTGGCCTTAGCATAGTTAAGTGTGAAATATCCCCAATCCTGAAATCCCCAACTCCTAGTGTTTCTCCTAGAATCAGCACCAGCAGGAAAAGTCTAAGGACATCATCGGGGGTATCTCCTTCTGAGAATGATGTTCACGTTGAACGTGAATTGGGCATAAAGACTAGCAATCTGAAAAGCTCATCCACTGCCTTTTCTAGTCAGACAGGTCCAAGTTTCCTTACAAAAACTGAAAATTTAGCTGCAAGCATTCGCCATGGTCTTGAAATTATAGATAGTCATCGTAGTGCAGCTTTGAGGCAGTCATCATATAGGTTTTCATTACGACCAAGAGAATCCAGACAAACGTTCCCAGTTGACAAAGTTGATGTGGGCGTGCAGACGTTTCTTGATGACAATGTTGAAGAAGATTCTATTTTGTTCACCTGTAGTAATTGTAAAAACAGAACACAACTTGATGTCAATGAGACTGACAATAGCTCAAACCTACAGTTGGTACCTGTTGATGATAGCTCAAACCTACAGCTGGTACCTGTTGATTGCTTCGGGTCTGCTGATAAGCCAAGCAAGCAAGTTCTCAAAGCAGTAGAGAAGGTCTTGGCAGGATCAATAAGGAGAGAAATGGCACTAGAGGAATTTTGTGCAAAGCAGAATTCTGAAATAATGCAGCTTAATCGCTTGGTACAACAATACAAGAATGCGATGGAATGCAATGCCGTAATTGCAAAGACAAGGGATGAAAAAATTCTTCGCCTTGAGAGCCTTATGGATGGTGTCTTACCTACCGTGGAGTTTATGGATGAAGAGCTGGTAGCTCTTACCCATGAACACAAGGTTTTAAAGGAGAAATACGAGAACCATCCAGAAGTATTGAAGATGGATATAGAGTTAAAAAGATTACAAGATGAACTACAAGAGTATCAAAATTTCTACAAATTGGGAGAGAGGGAAGTATTGATGGAAGAGATACAAAGTTTAAGAAGCCAACTTCAATTTTATATTGATTCTTCATCCACAGCAAGGAAGCAGTATCCATTACTGCAATTGACTGGTTCATCTGAACCCAATTTGGCAGCAACAACTCTCACTGCCATTCCAGAGTCAACAGAGGAGAGGAACGACACAAATGAAATTCAAGCATCAATCAAAGACAGTTTTGAAGTAAAACTTGAACAAGAAAGAATTAAATGGACTGAGGCAGAAAGCAGGTGGATATCTCTTTCTGAAGAACTGAGAGCCGATCTTGAAGCTAACAGGTCGTTAGCTGAAAAGAGGAAACACGAATTAGATGCTGAGAGGGAGTGTACTAAGGAACTTCAGGAAGCCATGCATACGGCTATAGAAGGACATGCACGGCTTTTAGAACAGTATGCAGATTTGGAAGAGCAGCACGTCCAGTTGCTTGCAAGGCATAGAAGGATCCAAGAAGGAATTGAGGATGTCAAGAAAGCGGCTTCCAGAGCTGGGGTAAGAGGTGCAGAGTCGAAGTTTATAAATGCCCTTGCTGCAGAAATTTCAGCATTAAAAGCAGAAAGGGAAAAAGAAAGGCGAATCTTAAGGAACGAAAATAGAGGGCTCCAAGCCCAATTGAAGGATACCGCAGAAGCAGTGCAAGCTGCAGGTGAACTGCTTTTCCGGCTTAAAGAAGCCGAAGAATCTGTCGTTAATGCACAGAAACGGGCTATGGATGCAGAGCAGGAAGCCGCAAAGGCCTACAAACAAATTGATAGGTTGAAGAAGACACATGAGAAGGAGATTGTCTCACTTAATGAGCTTGTTGCAGAAGCACGTTTGCAGAAGGAATCGGTACCACCAGTTTATGATGTTGTCATGCCCAATTATGATGACGACTCAAAGGAGCCACCCTATGTTAGTGATCAGTTTGAGCCTTTTAATAATAATATTGCAGAAGATGTCGAGCTTGCAAAATTGGCAGAACCATCCTGGTTCTCTAGTCATGACAGATGCAACATATAA 3756 0.4278 MKHFMLPRNATARDAAELPSSSSPSSSAKSRPTRKHSQTKENSDPNCTVTSSPSHVKLKSPLPPRPPSSNPLKRKLALDTLAADNSLPATSDSGVKVIVRMRPLRNDKDEGDPIVQKISGDSLTINGHSFTFDSVADVDSTQLDIFEHVGVPLVENCLAGFNSSVFAYGQTGSGKTFTMWGPANSLSEENVAKEQQGLTPRVFERLFARINEEQIKNSDQQLNYQCHCSFLEIYNEQITDLFDPNQKNLQIREDVKSGVYVENLTEEQVSTMKDVTQLLLKGLSNRRIGATSINSESSRSHTVFTCVVESRCKSAADGVSRLKTSRINLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEVMQDNVNHLRQVIRQLRDELHRIKENGYNPMDPSGGHSAAWVRKSLNILQSSLNRPPPLCRVDEDGDEEMEIDEEEVEDQDQVNFASENGNKMDTDDQDFAQPCEEKNNVSAGTKFLNEESSCPVGEPDSGDFSGFSASDPSGDSPSATVNCVSPGGLSIVKCEISPILKSPTPSVSPRISTSRKSLRTSSGVSPSENDVHVERELGIKTSNLKSSSTAFSSQTGPSFLTKTENLAASIRHGLEIIDSHRSAALRQSSYRFSLRPRESRQTFPVDKVDVGVQTFLDDNVEEDSILFTCSNCKNRTQLDVNETDNSSNLQLVPVDDSSNLQLVPVDCFGSADKPSKQVLKAVEKVLAGSIRREMALEEFCAKQNSEIMQLNRLVQQYKNAMECNAVIAKTRDEKILRLESLMDGVLPTVEFMDEELVALTHEHKVLKEKYENHPEVLKMDIELKRLQDELQEYQNFYKLGEREVLMEEIQSLRSQLQFYIDSSSTARKQYPLLQLTGSSEPNLAATTLTAIPESTEERNDTNEIQASIKDSFEVKLEQERIKWTEAESRWISLSEELRADLEANRSLAEKRKHELDAERECTKELQEAMHTAIEGHARLLEQYADLEEQHVQLLARHRRIQEGIEDVKKAASRAGVRGAESKFINALAAEISALKAEREKERRILRNENRGLQAQLKDTAEAVQAAGELLFRLKEAEESVVNAQKRAMDAEQEAAKAYKQIDRLKKTHEKEIVSLNELVAEARLQKESVPPVYDVVMPNYDDDSKEPPYVSDQFEPFNNNIAEDVELAKLAEPSWFSSHDRCNI* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4638 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 462 IPR027417 -
Tpr2g4638 1251 MobiDBLite consensus disorder prediction 42 57 - -
Tpr2g4638 1251 Coils Coil 1043 1063 - -
Tpr2g4638 1251 SMART kinesin_4 92 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g4638 1251 Coils Coil 437 464 - -
Tpr2g4638 1251 Pfam Kinesin motor domain 115 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g4638 1251 ProSitePatterns Kinesin motor domain signature. 325 336 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr2g4638 1251 Coils Coil 1091 1129 - -
Tpr2g4638 1251 Coils Coil 807 827 - -
Tpr2g4638 1251 Coils Coil 883 910 - -
Tpr2g4638 1251 MobiDBLite consensus disorder prediction 609 635 - -
Tpr2g4638 1251 ProSiteProfiles Kinesin motor domain profile. 94 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g4638 1251 PANTHER KINESIN-LIKE PROTEIN KIN-12B 61 536 - -
Tpr2g4638 1251 PANTHER KINESIN-LIKE PROTEIN KIN-12B 552 1251 - -
Tpr2g4638 1251 Coils Coil 856 876 - -
Tpr2g4638 1251 PANTHER CENTROMERE PROTEIN E 61 536 - -
Tpr2g4638 1251 PANTHER CENTROMERE PROTEIN E 552 1251 - -
Tpr2g4638 1251 Coils Coil 1005 1025 - -
Tpr2g4638 1251 Coils Coil 1140 1192 - -
Tpr2g4638 1251 MobiDBLite consensus disorder prediction 1 71 - -
Tpr2g4638 1251 MobiDBLite consensus disorder prediction 15 32 - -
Tpr2g4638 1251 MobiDBLite consensus disorder prediction 609 639 - -
Tpr2g4638 1251 Gene3D Kinesin motor domain 86 464 IPR036961 -
Tpr2g4638 1251 PRINTS Kinesin heavy chain signature 160 181 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g4638 1251 PRINTS Kinesin heavy chain signature 291 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g4638 1251 PRINTS Kinesin heavy chain signature 326 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g4638 1251 PRINTS Kinesin heavy chain signature 380 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4638 Tpr-Chr2 51618566 51625455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4638 20 462 Miscellaneous Gene Families AT4G39050 35.111 3.16e-63 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4638 K10400 - gmx:100785790 1822.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4638 2 51618566 51625455 Tpr2g4638 2 51618566 51625455 ECH