Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4633 ATGGAAGTACCTCAAGACATTGCTTTTGAGATATTTTCTTGGCTACCCGCAAAAAGCATTTGCAAGTTCAAATCAACTTGCAACCCAATTTCCAAATTTTCGGAAGAAACACTTTTTAGAATAAAGCAGACTCAAAATTTATTCGGGAAGGATGACACATGCTTATTCATTCAACCCAATGAAATAAGTCAAAGATACGTCACAGAAAGGGTAGAGTTGCATTCTTTACCTAAGCACCAACTGTCTTCTGGTGCCCCTAACAATGTTTTGAGTTTCCTATCAAAAAATACAACTAGTGTCATAGCTTCAAGTAATGGTCTAGTTCTTTGTCACAACATTGATGATCCGGTTAAAGTTTTCATATGCAACCCAATAACAAAATCTTGGTCCTCTATTCCAATCCCAGAGTCACTTCAAACACAAAATAATTTTGCTAATGCAAAATTCATGTTACATTGCTCTTTAGACGACTACAAAGTGTTTATTTTTGAAAACACAATGGAATGGGCGCCAACTTGTTATAGATGCAATGTTTATCATGGCAAGGAAGGTGTGTGGAAAACAATGGAACATGGGTTTTTACCTGGTGGAAGGAACATGGAATTTGACATTCCTGTATTTTTCAATGGGTCACTTCATTTTATCTCGGATAGTGGTCAATACTTTATGAAACCTAGTCCTTTTTATAAGCCATATATCATGTCTTATAATTTAGAGAATGGAACTTCAACTATGCTTAGGTTACCAAGAGAAGCCATAAGAGGTTGTCATCATATCACATGTAAGATGGGCATATTCAATTGGGGAAAAGCTTCTAACTCGAATGGATCACTATGTTTGGTGAAATTAAGTAAGTCTACTTTTACCGTTTGGTTTTTAGGAGATTATGAGTCATGTTCTTGGGAAAAGGTTTTTAAAATGAGGGTGAAGGCAATGGGATTGAAGGAGAAAGATCTTGATGTTACATCGTTTACAATTGTGAACGGTATTCTTTTAGTGTTTGCTACAAATGAAAGGGTTTATAGCTGTGGTTTGGATGACAAAAGATTTATGATGATTGAAGAAATATGCCAACACAATTGTGGATCCAACCCCCGCATTATCTCCTACTTGGACACTTATCGTTCTTGTGGGATTAACGCTGAAACTATGCCTTGCTAG 1161 0.3626 MEVPQDIAFEIFSWLPAKSICKFKSTCNPISKFSEETLFRIKQTQNLFGKDDTCLFIQPNEISQRYVTERVELHSLPKHQLSSGAPNNVLSFLSKNTTSVIASSNGLVLCHNIDDPVKVFICNPITKSWSSIPIPESLQTQNNFANAKFMLHCSLDDYKVFIFENTMEWAPTCYRCNVYHGKEGVWKTMEHGFLPGGRNMEFDIPVFFNGSLHFISDSGQYFMKPSPFYKPYIMSYNLENGTSTMLRLPREAIRGCHHITCKMGIFNWGKASNSNGSLCLVKLSKSTFTVWFLGDYESCSWEKVFKMRVKAMGLKEKDLDVTSFTIVNGILLVFATNERVYSCGLDDKRFMMIEEICQHNCGSNPRIISYLDTYRSCGINAETMPC* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4633 386 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Tpr2g4633 386 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 43 384 - -
Tpr2g4633 386 TIGRFAM F_box_assoc_1: F-box protein interaction domain 104 312 IPR017451 -
Tpr2g4633 386 PANTHER PROTEIN, PUTATIVE-RELATED 43 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4633 Tpr-Chr2 51557566 51558726 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4633 - - mtr:MTR_1g016400 521.546