Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4628 ATGGTGTACAACCAATCTAATACACGAGTAGCACATGGAGATTTTTCAATTCAAACGTCCCCCACCAGTCACCATCACCAATTATATAAACACTTCCCATCAAACTATACAAACATAACCTGCACGTCACATACATTCACTCATACCACACTTGCCACCACTATCATGGCGCAAAACCATAATTTCCTCATCATCACATACCCCTTACAAGGTCACATAAACCCCGCTATCCAATTCGCCAAGCGACTCGTTACTATGGGTGCACAAGTCACTTTTGCTACCACTATCTACTTACACCGTCGTCTTGTCAACAAACCAACCATCCCCGATCTCTCCTTCGCAACTTTTTCCGATGGCTTTGATGACGGTCACGAAAACAAAAGTGACGACAACTTTATCACCTACATGTCTGAGCTTCAATGTCGAAGCTCAGAATTTCTCACAAGTATCATACTCTCTGCCAAACAGGAAGGTCGTCCATTCACTTGCTTAATCTACAGTCTCATCATTCCTTGGGTCCCAAAAGTGGCGCGTGAGCTTCACCTCCCATCGGCACTTCTATGGATTCAAGCAGCAACGGTATTTGATATCTACTATTACTATTTTCTCAACCACGGTGACTACATCACAAACATATCAGACAATGCCAAGTGCTCGATAGATTTACCAGGATTGTCATTTTCTCTTAAAAGTTGTGACCTTCCATCTTTTTTACTGGCTTCAAATACGTACACTTTTGCTCTTCCATCTTTCAAAGAGCAACTTCAAATTTTGGATGAAGAAACCAACCCAAGAGTACTTGTGAACACTATTGAGGAGTTTGAATTAGATGCACTCAGAGTCGTTGATGTTGGTAAGATTAAAATGATACCCATCGGACCATTGATTCCATCAGCTTTCTTGGATTGTAAGGATCCTTCAGATACTTCATTTGGTGGAGACGTTATCCGTGTGGATTCGGATGATAATTACATTGAATGGTTGGATTCGAAGGATGAGTTATCTGTAGTTTATGTTTCATTTGGTTCTCTAGCAATTTTGCCTAAGAGACAAATGGAGGAAATTGCGCGTGCATTGTTGGATTCTGGATTTCCATTTTTGTGGGTAATTAGAGATAAAAACTTGCAACAACAAAAAGAAGAGGAGGACGAGTTGAGTTGTAGAGAGGAAATTGAGAAGAATGGTAATGGGAAGATAGTGAAATGGTGTTCACAAGTGGAGGTTCTGTCACATAGTTCATTGGGTTGTTTTGTGACACATTGTGGATGGAATTCAACGTTGGAAAGTTTAAGTTCCGGGGTTCCTATGGTGGCATTTCCTCAGTGGACAGACCAAACTACTAATGCCAAGCTAATTGAAGATGTGTGGAAGACTGGGGTGAGGTTAAATCATGATGATGAAGGAATAGTGAAAGCTGAGGAAATTAGGAGATGTTTGGAACTGGTTATGGGGAAGGGGGAAAAAGGAGAGGAACTAAGAAGGAATGCTAACAAATGGAAGAGTTTGGCTAGGGAAGCTGTGAAGGAAGATGGGTCCTCAGATAAAAATCTGAAGACTTTTCTAAGTGATATTTGA 1575 0.4102 MVYNQSNTRVAHGDFSIQTSPTSHHHQLYKHFPSNYTNITCTSHTFTHTTLATTIMAQNHNFLIITYPLQGHINPAIQFAKRLVTMGAQVTFATTIYLHRRLVNKPTIPDLSFATFSDGFDDGHENKSDDNFITYMSELQCRSSEFLTSIILSAKQEGRPFTCLIYSLIIPWVPKVARELHLPSALLWIQAATVFDIYYYYFLNHGDYITNISDNAKCSIDLPGLSFSLKSCDLPSFLLASNTYTFALPSFKEQLQILDEETNPRVLVNTIEEFELDALRVVDVGKIKMIPIGPLIPSAFLDCKDPSDTSFGGDVIRVDSDDNYIEWLDSKDELSVVYVSFGSLAILPKRQMEEIARALLDSGFPFLWVIRDKNLQQQKEEEDELSCREEIEKNGNGKIVKWCSQVEVLSHSSLGCFVTHCGWNSTLESLSSGVPMVAFPQWTDQTTNAKLIEDVWKTGVRLNHDDEGIVKAEEIRRCLELVMGKGEKGEELRRNANKWKSLAREAVKEDGSSDKNLKTFLSDI* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4628 524 ProSitePatterns UDP-glycosyltransferases signature. 402 445 IPR035595 -
Tpr2g4628 524 CDD GT1_Gtf-like 61 506 IPR002213 GO:0008194
Tpr2g4628 524 Gene3D Glycogen Phosphorylase B; 65 517 - -
Tpr2g4628 524 Gene3D Glycogen Phosphorylase B; 310 505 - -
Tpr2g4628 524 PANTHER GLYCOSYLTRANSFERASE 59 522 - -
Tpr2g4628 524 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 58 522 - -
Tpr2g4628 524 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 59 522 - -
Tpr2g4628 524 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 326 464 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4628 Tpr-Chr2 51514260 51516264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4628 61 523 Glycosyltransferase AT4G15550 47.107 2.71e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4628 - - pvu:PHAVU_001G265400g 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4628 2 51514260 51516264 Tpr2g4628 2 51514260 51516264 ECH