Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4619 ATGCCGAAGGCTAAAGTTGATTCCAAACCCGCTGATAACAGTGTTGCACTAGCTGTGGATAATCCAGAAATGTTTAATCGGATTGCAAAAGCGTTTAATTTGAAGGCTTCAATGAGATTTATTATTCTTCTGTTGGGAGAAAAATCAAACCTGGTCAATGAAGGAAACAAGGAAGTGCCAATCTTTACATTCACGGAAGTCATAAATTTTGGAAAAGAGAGCCGCAGGTCATTGTTTGAGTCTCATAATGCTAGGAAGCACTATGTGTTTGAAGCAATAAAATCTGACGACATTGCTACCCTTGTATACACAAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATTAAATTTTATTCGGACATTGTACCTGCTGAAGTTGGGGACAGATTTCTAAGCATGCTGCCTCCTTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTCTCACGCGGTGTTGACCAAGTATATACAACTGTGAGAAACTTGAAGGATGATTTGGGACATTACCAGCCGCATTACTTGATTTCCGTTCCTTTAGTTTATGAGTCTTTGTACAGTGGGATCCAGAGGCAGATTTCTACAAGCTCCCTTGTTAGAAAGCTTGTTGCACTGACATTCATAAGGGTCAGCTTAGGGTACATGGAATGTAAGCGAATTTATGAGAAAGAAGAAATCGATAAGGGCTGTCAAATGGGATAA 732 0.3962 MPKAKVDSKPADNSVALAVDNPEMFNRIAKAFNLKASMRFIILLLGEKSNLVNEGNKEVPIFTFTEVINFGKESRRSLFESHNARKHYVFEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKFYSDIVPAEVGDRFLSMLPPWHAYERACEYFIFSRGVDQVYTTVRNLKDDLGHYQPHYLISVPLVYESLYSGIQRQISTSSLVRKLVALTFIRVSLGYMECKRIYEKEEIDKGCQMG* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4619 243 ProSitePatterns Putative AMP-binding domain signature. 101 112 IPR020845 -
Tpr2g4619 243 SUPERFAMILY Acetyl-CoA synthetase-like 82 208 - -
Tpr2g4619 243 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 13 237 - -
Tpr2g4619 243 PRINTS AMP-binding signature 96 107 IPR020459 -
Tpr2g4619 243 PRINTS AMP-binding signature 108 116 IPR020459 -
Tpr2g4619 243 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 13 237 - -
Tpr2g4619 243 Pfam AMP-binding enzyme 63 210 IPR000873 -
Tpr2g4619 243 Gene3D - 17 220 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4619 Tpr-Chr2 51364178 51373499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4619 14 232 Acyl Lipid Metabolism Gene Families AT3G23790 66.667 1.50e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4619 K01897 - gmx:100782583 381.333