Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4608 ATGAGTACGGTCGATAAGATGCTGATCAAAGGCATCCGTAGTTTCGACCCTGAGAACAAAAACGTCATCACCTTCTTCAAACCCTTAACCCTAATCGTCGGTCCCAACGGTGCCGGAAAAACTACTATCATAGAATGCTTGAAGCTTTCATGCACTGGTGAATTGCCACCAAATGCTAGGTCTGGCCACAGCTTCATTCATGATCCTAAGGTTTCCGGTGAAACGGAAACCAAGGGACAGATTAAGCTCCGGTTTAAAACCGCCGCCGGTAGAGACGTGGTTTGCATAAGGTCGTTTCAACTCACTCAAAAAGCATCTAAGATGGAATACAAAGCAATTGAAAGTGTGCTTCAAACTATTAATCCTCATTCGGGCGAGAAAGTTTGCCTTAGCTATAGATGTGCTGACATGGATAGAGAGATTCCTGCACTGATGGGTGTTTCAAAGGCCATTTTGGAAAATGTTATATTCGTTCATCAAGATGAAGCTAATTGGCCGCTTCAGGATCCTTCCACGTTGAAAAAGAAGTTTGATGATATCTTTTCGGCAACTCGATACACAAAGGCACTGGAGGTTATAAAGAAACTTCACAAGGATCAAGCTCAAGAGATAAAGACTTACAAGCTGAAACTGGAAAACCTTCAAACTTTGAAAGACGCGGCTTATACGCTTCGGGAAAGCATAACACATGATCAAAAGAAAACAGAATCTCTAAAAGATCAGATACAGCAGTTGGGTGGAAGCATTAAAGATTTGGACACTAAAATTGATCATGCGGAAAAAACATTGAAACACTTGCGGAATCTAAAGGAGCAAATAAATGCTAAAACTACAGAACGAAGCACTCTTTTTAAGGAACAACAGGATAAACATTCCGCTCTTGATGAGGAGTATGAAGAATCTGATGAAGAGTTGATGGAAATGAAGACCAACTTTGATGAAAAGATTGCAATTGCTAGAACACAAATAAACAAATTGGAAAGAGAGAAGAAAGACATTAGCACAAAAAGTGATTGCCTTAAGAACACAGTCAATGAGTCCATCTGGGAGATCAGCAAGCTACAAACTGAAGCAGAAGCTCACATGTCTTTGAAGAAGGAACGAGATACTTGCATTCAAAATATTTTTGCCAGGTATAACTTAGGTTCTCTTCCGAAGCCACCCTTCAGTGCTGAAGATGCTTTGAACCTCACCAATCGTGTAAAATCAAGGTTGGGGGATCTTGAGAAGGATCTTGACGATAAAAAGAAAGCAAATAACACTGAACTCCAGATGGCATGGGATTGCTACTTGAGTGCAAATGAAAGTTGGCAAAATACTGAGGCTAAAATACAAACTAAGAGAGAGATCAAGGTTGATATTATAAAGCGCATTGAAGAGAAGAAAAATAAGCTTGATTCATTTGAACATCAAATATCTAATATAAATTTTTCTCAGTTAGATGAGAGAGAAAGAGACTTGCAAATTCGGCTGGAGAGGATGATCAAGCAACACGAGGAAAGCAAATTTGAACAAAAGAAAAGTCAAAATGAAATTGAAGTCCATAATGTGGAGCAAAAGATTAAAGCTGTCAATCGAGAGTTGGTTACCATGGCTAGTGATTCATCGGACAGAGAGAAACTATCTGTTTTGAAGGGAGGCTTGGAGAAGAAGAAGAAGCAACATAAAAAGATAATTGATGACCAAAAAGATAAAATAAGAAGGGTGCTAAAAGGGAGGATTCCTAGCGATAAGGACTTGAAGAAGGAAATAACACAATCATCAAGGGCTGTTGTAGCTGAATATGATGAGCTGAATGCTAAGTATCGGGAACTTGACAAGGAAGTAAATGTTTTGCAGATGAAAATACAAGAAGTAGACAATAGTCTTTCTAAACACCACAAGGATATGGAATCAAGAAAGAGATTTATTGAATCCAAGCTTCAGTCTTTGGATCAGCATTGTTCCGGAATTGATTCTTATCTCAAAGCTTTAGAGTCTGCCAAGGAGAAGAGAGATGTACAGAAAAGCAAATATAACATTGCCGATGGTATGCGACAAATGTTTGATCCTTTCGAAAGGGTTGCCAGAGCCCATCATTTTTGCCCTTGCTGTGAGCGTTCTTTCTCGGTAGAAGAAGAAGACAGTTTTGTCAAGAAGCAAAGAGTGAAGGCTGCTAGTTCAGCTGAACATATGAAAGCTCTCGCTGTGGAGTCCTCCAGTGCAGACTCTGATTATCAGCAGTTGGACAAGCTTCGTATGTGGTACGAAGAATATGTTAAACTTGGCAAGGAGACAATCCCTAATGCTGAAAAGGAACTCCAGCAAGGGAAGGAGGAGCTGGATCACAAATCCCAGGCACTTGATGATCTTTTAGGTATTTTAGCTCAAGTAAAGACCGAGAAGGATTTGGTTGACATAGTGGTGCAGCATGTTGAAAATGCTGATCGACTTTTCCAAGAAATTCAAACTTTGCAGTCAGATGTTGAGGATTTAGAAAGTAGGCTTGATTGTGGAGGACTAGGTGTAAGGACTCTAGAAGAAATTCAATCTGAGCTCACTGCATTGCAGGGAACAAAGGACAATTTGCATACCGAGATGAGGAAAATGATGGATGACGACAGCTATATGAAGAAGGATATATTAAATTTCACGAACCGGTTGAACCATGCAACGAATGATAAAAATAAAGCAGCTACCAAATTGCAAGAAGTTAAAAGATTAGAAGAAGATTTGGAACACTTAACTGAAGAAATGACCCAAGTTGATCTTGATGAGAAGAGTCTGCTAGAAGCTGTTGGACCTTTATGCAAGCGCAAGGATAAATTAGTTGCTGATTATGATGAACTAAAAAGTAGACTTGACAACGAGCATGAGAATTTGGTTGGTAAAATGAGAATTTATCAGCAAGAAGCCGAATATGTTTTTAGAATGACTTCTAAGATCAAAGAGTACTCTGAATTAATGAAAGGAGACAGGTTGAAGGAGCTGCAGGAAAAGAAATCTCTGTCAGAATCTCAACTGCAAAGTTGTGAAACCAGGATGCAGAAAATTATAGAAGAACTAGACAAAAAGAAAGAATTGATGAGAAATGCTGATCCGCTTAGAAGAATAATTGAAGACAACATAAATTACAGAAAAACAAAGGCTCAAGTTGATAAGCTATTACATGAAATTGAAACACTTGAAGAAAGTATGTTGAAGGTTGGTGTATTTGACACAATTGAAAAGGAACTCCAGAAATTATCCAAGGAGAGGGAGAGGCTTCTTGAGGAGTCAAACAGGTGCAAAGGAACAATGGATGTTTACCAGAGCAATATTTCCAAAAATAAGATTGATCTTAAGCAGGCCCAATACAAAGACATAGATAAGCGATACTTTGACCAGCTTATCCAGCTTAAGACAACTGAAATGGCAAACAAGGACTTGGACAGATACTACAATGCACTTGACAAAGCACTGATGCGTTTCCACACCATGAAAATGGAAGAAATCAACAAAATTATAAGGGAGTTGTGGCAACAGACTTATAGAGGACAAGATATTGACTGCATTAGTATTCATTCTGATTCTGAAGGTGGTGGCACCCGTTCCTACAGTTATAAGGTTCTCATGCAGACTGGTGATGCTGAATTGGAAATGAGAGGAAGATGTAGTGCAGGTCAGAAGGTACTGGCATCTCTTATCATACGGTTGGCTTTAGCTGAAACGTTTTGCCTCAATTGTGGAATTCTTGCATTGGATGAACCAACAACAAATTTGGATGGACCAAATGCTGAAAGTCTGGCTGCTGCTATCCTAAGGATCATGGAGGACAGGAAAGGCCAGGAAAATTTTCAGCTGATTGTAATTACTCATGATGAGCGTTTTGCTCAACTGATTGGTCAGCGCCAGCATGCAGAGAGATATTATCGAGTCGCAAAAGATGATCATCAGCACAGTATAATCGAATCACAGGAGATATTTGACTGA 3951 0.3933 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVSGETETKGQIKLRFKTAAGRDVVCIRSFQLTQKASKMEYKAIESVLQTINPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYTLRESITHDQKKTESLKDQIQQLGGSIKDLDTKIDHAEKTLKHLRNLKEQINAKTTERSTLFKEQQDKHSALDEEYEESDEELMEMKTNFDEKIAIARTQINKLEREKKDISTKSDCLKNTVNESIWEISKLQTEAEAHMSLKKERDTCIQNIFARYNLGSLPKPPFSAEDALNLTNRVKSRLGDLEKDLDDKKKANNTELQMAWDCYLSANESWQNTEAKIQTKREIKVDIIKRIEEKKNKLDSFEHQISNINFSQLDERERDLQIRLERMIKQHEESKFEQKKSQNEIEVHNVEQKIKAVNRELVTMASDSSDREKLSVLKGGLEKKKKQHKKIIDDQKDKIRRVLKGRIPSDKDLKKEITQSSRAVVAEYDELNAKYRELDKEVNVLQMKIQEVDNSLSKHHKDMESRKRFIESKLQSLDQHCSGIDSYLKALESAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHFCPCCERSFSVEEEDSFVKKQRVKAASSAEHMKALAVESSSADSDYQQLDKLRMWYEEYVKLGKETIPNAEKELQQGKEELDHKSQALDDLLGILAQVKTEKDLVDIVVQHVENADRLFQEIQTLQSDVEDLESRLDCGGLGVRTLEEIQSELTALQGTKDNLHTEMRKMMDDDSYMKKDILNFTNRLNHATNDKNKAATKLQEVKRLEEDLEHLTEEMTQVDLDEKSLLEAVGPLCKRKDKLVADYDELKSRLDNEHENLVGKMRIYQQEAEYVFRMTSKIKEYSELMKGDRLKELQEKKSLSESQLQSCETRMQKIIEELDKKKELMRNADPLRRIIEDNINYRKTKAQVDKLLHEIETLEESMLKVGVFDTIEKELQKLSKERERLLEESNRCKGTMDVYQSNISKNKIDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDCISIHSDSEGGGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAILRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHSIIESQEIFD* 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4608 1316 Coils Coil 451 471 - -
Tpr2g4608 1316 Coils Coil 881 918 - -
Tpr2g4608 1316 PANTHER RAD50 1 1314 - -
Tpr2g4608 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 322 IPR027417 -
Tpr2g4608 1316 Coils Coil 808 828 - -
Tpr2g4608 1316 Coils Coil 1065 1092 - -
Tpr2g4608 1316 Coils Coil 760 780 - -
Tpr2g4608 1316 Coils Coil 933 964 - -
Tpr2g4608 1316 TIGRFAM rad50: rad50 3 1310 IPR004584 GO:0000723|GO:0005634|GO:0006281|GO:0016887|GO:0030870
Tpr2g4608 1316 Gene3D - 1056 1315 IPR027417 -
Tpr2g4608 1316 Coils Coil 839 859 - -
Tpr2g4608 1316 Coils Coil 1038 1058 - -
Tpr2g4608 1316 CDD ABC_Rad50 4 170 IPR045171 -
Tpr2g4608 1316 Coils Coil 588 622 - -
Tpr2g4608 1316 Coils Coil 651 671 - -
Tpr2g4608 1316 Pfam AAA domain 7 244 IPR038729 GO:0140664
Tpr2g4608 1316 Gene3D - 809 985 - -
Tpr2g4608 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1286 IPR027417 -
Tpr2g4608 1316 Coils Coil 197 217 - -
Tpr2g4608 1316 Coils Coil 249 343 - -
Tpr2g4608 1316 CDD ABC_Rad50 1205 1308 IPR045171 -
Tpr2g4608 1316 Gene3D - 4 423 IPR027417 -
Tpr2g4608 1316 Coils Coil 987 1021 - -
Tpr2g4608 1316 Coils Coil 507 527 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4608 K10866 - gmx:100818545 1925.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4608 2 51122112 51136439 Tpr2g4608 2 51122112 51136439 ECH