Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4607 ATGGATCGTTCATGGGAGGAAGGAAAAAGGGAGGAGGAGATTGGTTTCAGGCGACTCGCCTCGTTCGTGTGCGAATTTGAGCCTTTATCTCAGGAAGATCTTCAAGCCATTGACGCCACTCTTCAATCTTCTCTCCCCAAATCCACCACCACCACCACCAACACCACCACCAACAACAACAACAAACGTCCATTCTCCTCTCACTCTCCCACTCGCCACCGCAGCCGCCGCCACTTGCCAACATCTCTCATCGCTCTTCAACTCCCACGTTCTCTCTCTTTCTCACCTTCTCCAGGCCATTCAAAGATGCGGTTGCCTGTAATGAAGTTTTGTGGGAAAATTTTGTATAGTAGGACTTTTAATGATGTTGAGAAGGCTGTAACAAAGTTCATAAAAAATATTGAAGAAAAGAAAAGAGAGATGATGCAAATTGCAATTGGGTTTGACATTGAGTGGAAACCCACCTTCAGAAGAGGTGTTCCACCTGGGAAAGCAGCAGTGATGCAGATATGTTGTGACACTAATCATTGTCATGTTCTTCATCTAATTCATTCTGGAATCCCTCAAAATCTACAGCTTTTACTTGAAGATCCCACAGTTTTGAAGGTTGGAGCTGGGATTGCCGGTGATGCTACAAAGGTTTCTAGAGATTATGGCATATCCATTAAAGGTGTGGAAGATCTTTCTTTTCATGCTAATCAAAAGATAGGCGGGGGTCTGCATAAGTGGGGTCTTGCATCTTTGACCGAAAAACTTTTATCAAAACAGCTTATGAAGCCCAGCAAAATAAGAATGGGGAATTGGGAGACTCCTTTTTTGTCAAAGGAACAACTAGACTATGCTGCCACGGATGCTTTTGCTTCTTGGTTTCTCTATCAGGTACTACGGAATTCTTTGATGGTCAAGATAAGACTATTAAAGATCTTCCAGATGTGCAGGATGTTACCGACAAAGGTAGTGAAGTTGACGTTGTGCCGCAACAATGACCATATCTCATGTCTGTGTAACATAATCCATTTCTTGTAA 1026 0.4318 MDRSWEEGKREEEIGFRRLASFVCEFEPLSQEDLQAIDATLQSSLPKSTTTTTNTTTNNNNKRPFSSHSPTRHRSRRHLPTSLIALQLPRSLSFSPSPGHSKMRLPVMKFCGKILYSRTFNDVEKAVTKFIKNIEEKKREMMQIAIGFDIEWKPTFRRGVPPGKAAVMQICCDTNHCHVLHLIHSGIPQNLQLLLEDPTVLKVGAGIAGDATKVSRDYGISIKGVEDLSFHANQKIGGGLHKWGLASLTEKLLSKQLMKPSKIRMGNWETPFLSKEQLDYAATDAFASWFLYQVLRNSLMVKIRLLKIFQMCRMLPTKVVKLTLCRNNDHISCLCNIIHFL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4607 341 Pfam 3'-5' exonuclease 124 299 IPR002562 GO:0003676|GO:0006139|GO:0008408
Tpr2g4607 341 PANTHER 3-5 EXONUCLEASE 35 297 - -
Tpr2g4607 341 Coils Coil 120 140 - -
Tpr2g4607 341 Gene3D - 99 300 IPR036397 GO:0003676
Tpr2g4607 341 MobiDBLite consensus disorder prediction 45 66 - -
Tpr2g4607 341 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 35 297 - -
Tpr2g4607 341 MobiDBLite consensus disorder prediction 45 76 - -
Tpr2g4607 341 CDD WRN_exo 122 297 - -
Tpr2g4607 341 SUPERFAMILY Ribonuclease H-like 146 296 IPR012337 -
Tpr2g4607 341 SMART 35exoneu6 128 300 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4607 K22807 - gmx:100801291 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4607 2 51110578 51118175 Tpr2g4607 2 51110578 51118175 ECH