LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g4580	ATGGCCAAGAAACGTGTTCCCGATTGGCTCAACAGTCCTCTCTGGTCATCTCCCTCCGAACAACACCGCTTCTCCTCCGCCGTTCCTGAACCACCGGAACAACCTCCTTCTCCACCTCCTCTCACCATCAAACAAGATCCTCCTTCAATTCAACATTCCCGAACCAATCACAATCACAATCACAATGCCATTGCCATTGCCACTTCTTCTTCTTCCTCTTCCGCTTCTACTTCCTCCGCCGATGAAAATTCCCACTCCCGTCAGGCTCAGTCCCAGGCCAATTTGTTAGCCGAGTTATCTAGGAAGGTTATTGATATGCGTGAATTGAGAAGAATCGCATCTCAAGGAATACCTGATGTTTCTGGTTTACGTTCTACTGTCTGGAAGATTTTTCTAGGGTATCTTCCACCTGATCGTGGCCTCTGGTCCTCTGAATTAGCAAAGAAGAGGTCTCAATATAAACGATTCAAACAAGAGATTCTCATCAATCCTTCAGAAATCACGAGGAGGATGTGCAACTCTGGCAATTATGATGCTGATGAAGTTAAATGTGAGACCAGGGGCATCCTTTCTAGATCACAAATCACTCATGGGGAACATCCATTGAGTCTTGGCAAGACCAGCATATGGAATCAATTTTTCCAGGATACCGATATCATAGAGCAGATTGACCGTGATGTAAAGCGTACTCATCCAGATATGCCTTTCTTCTGTGGTGATTCTCAATTAGCAAAATCTAATCAGGAGGCTTTAAAGAACATATTAATTATTTTTGCAAAGTTGAACCCAGGTATTAGATATGTTCAAGGGATGAATGAAGTATTGGCTCCTTTATTCTATGTGTTCAAAAATGATCCTGACGAGGAAAACGCAGCCTTTTCTGAAGCAGACACATTCTTTTGTTTTGTTGAACTATTGAGTGGATTCCGCGATAATTTTTGTCAACAACTTGACAATAGTATTGTTGGAATTCGTTCAACTATAACAAGATTGTCTCAGCTTTTGAAAGAACATGATGAAGAACTATGGCGTCATCTTGAGGTCATGACCAAAGTCAACCCCCAATTTTATGCATTTAGGTGGATTACTCTCCTCTTGACTCAGGACTTCAGTTTTGTTGATATCCTTCGTATTTGGGACACCCTTATAAGTGATCCTGATGGTCCACAGGAGACACTTCTCAGGGTATGCTGTGCAATGCTAATTCTCGTCCGTAGGCGCCTCTTGGCGGGTGATTTCACTTCTAATCTCAAGTTGCTGCAAAGTTATCCTCCTACAAACATTAGTCATTTGCTCCATGTTGCCAATAAGTTACGTGTACAGCCAGTCTAA	1332	0.4257	MAKKRVPDWLNSPLWSSPSEQHRFSSAVPEPPEQPPSPPPLTIKQDPPSIQHSRTNHNHNHNAIAIATSSSSSSASTSSADENSHSRQAQSQANLLAELSRKVIDMRELRRIASQGIPDVSGLRSTVWKIFLGYLPPDRGLWSSELAKKRSQYKRFKQEILINPSEITRRMCNSGNYDADEVKCETRGILSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQIDRDVKRTHPDMPFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVMTKVNPQFYAFRWITLLLTQDFSFVDILRIWDTLISDPDGPQETLLRVCCAMLILVRRRLLAGDFTSNLKLLQSYPPTNISHLLHVANKLRVQPV*	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g4580	443	PANTHER	YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN	3	441	-	-
	Tpr2g4580	443	Gene3D	-	322	442	-	-
	Tpr2g4580	443	SUPERFAMILY	Ypt/Rab-GAP domain of gyp1p	98	345	IPR035969	-
	Tpr2g4580	443	SMART	tbc_4	113	412	IPR000195	-
	Tpr2g4580	443	ProSiteProfiles	TBC/rab GAP domain profile.	118	386	IPR000195	-
	Tpr2g4580	443	SUPERFAMILY	Ypt/Rab-GAP domain of gyp1p	323	440	IPR035969	-
	Tpr2g4580	443	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	205	314	-	-
	Tpr2g4580	443	MobiDBLite	consensus disorder prediction	29	45	-	-
	Tpr2g4580	443	MobiDBLite	consensus disorder prediction	1	49	-	-
	Tpr2g4580	443	Pfam	Rab-GTPase-TBC domain	216	407	IPR000195	-
	Tpr2g4580	443	MobiDBLite	consensus disorder prediction	68	93	-	-
	Tpr2g4580	443	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	3	441	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g4580	Tpr-Chr2	50682025	50687482	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g4580	K24796		-	gmx:100778830	645.195