Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4572 ATGACTGCAAAGTTTGATTGGACACCTGCTTCCGAGCCTCACAAGATGTCTGGAGCTACATCCACAGCACCTTCTAGTAGCCAAAAGCTGTCTAAATTTGGTGCCAAATCTGGATTTGTCATCCCCAAAAACAAGTTATTAGGATCGTTGGTCCCCATTTTACGAGGGGCTAAAAAGGATGGGGTCACTGGAGTAATCAATGAAGAAAGTCCAAAACAAATTGAGAGGAAATCGAGATGGGGGCCTGATCCAACACAGGATGCATCTGTCAAGAGGGCAAAGGTTTTGGCTTTGCAGATTCGAGTGGACCAAATTTCAAAGCAGTTGGAATCAGAAAATCTAGAAATTGGGGGAGCTCAAAACTCATCATTGGTGGATGAGAACCCAGATGAAAGCAAGTCTGGCTCTCAAACTAATAGCAAGTCAGAAATGCTCGAACTCGAAAAACGGGAAGCAATAGGTGAAATACTAAAATTGGATCCCAGTTACAAGCCTCCACCTGGTTTTAAACTGTTGTTAAAAGAAGACAGTCTTCCTTTGCCTGTTCACGAATATCCTGGGTACAAATTTGTCAGTCTAATATATGGGCCTGAAGGTGATAATCAAAAGCGACTAGAGAAGGAAACCGGTACCAAGATAAAAATTCATGGAACCAAAGCAGATACAGAGGAAAAAGGTGAAATTAAACCAGGTACTGATGTCCAGTGCAGTTACAAAGAGATGCACGTTAAAATATCAGCTGATAGTTTTGATAAAGTGGATGCAGCAATTTCCATCATTGAACTACTAATTTCCTCTGTAACTGGGAATTCGGCTGCTGATTCCACTTCTGTATCTGTTTCTGGGGACAACACTAACGTTCCAAATCAAAACCAAGACGCCCTCCCATCTCATGCAATTTCTCTATCTCAGGAAAACCAGGATGTGTTTCAATCAGCAGCCAATACACAAATGCAAGGAGATCGCTTTCAATACTCTGGTTCATGGTTTTCAGCCGTTCATACCCCTCTATTTGCTTCTTCTGGCAGCGTAGTCCCTCCAAATCCACCGCACCTTGCTAGAAATCCCCATTTTCCACCACAAAGAATGAGCCCTTCAAGTATGATTTCAGCTTTTGGTGCTCAACCTGCACCTGTTGCTGGGTTCCACCCGATTATTCCAAATCAGCAGTTTTCTATGCAAGCACCACCACCAACACAAATCTTTCAGCATTCACAATGGACTCAAACAACTCCTTTTGGTCATGTTGGGCCACCAAGAAATCCTTCTGTAATACCTGCACAGAATTTGACAGCACCAACAAATGCTTCAATTTCATTTCCAGCTTCTTTTAGCCAAAGCCAACCAACACCAACAGGACAACTCCAGACACTGACCCCTCACGGCGTATCTTCTGAACTGAGTGGAGGACCCGTCAATGTTAAAATATCTGTAGGTCTCAGCAATATGGGGTCTATGGCTCCACAGGCGGTTCCCCCCAAAAGACTTGTTTCTCTAGGTCCACAACCAGATGTACCCCAGCCAAATATGTCGGTGATGCCACGACCTGGCAGCATTCATCCACATCATGCGGGAATGTCGCCTAGACCATCATCATCTGTGGGACCAATACCAGGAACTGTTCATTCAACTGGAAACCATTTATCAGGACCGAGAATGCCTAATTCTGCCTCTCATTACACCCATGTAAAACCACTGGCCTCCATGCCTTCAAATTCTGGCAATTTTACTTTTCAAGGACAGCGGCCCAATGCAGACTACTATCAAGCGGTTCCCAGACCAAACAATCAAGCTACTACTCAGGGTGGTTCACAAGAGCCACCTTCCGGTCCACGGCCACCACCATTTGGATTTTCTGTACCTGATCAGCCTCTTCAAAGCTTTCAAAGGACACAAGTCCCCAACCAGGTGGATCCAACTCAAGCTTATGTCTCTGCTGCTCCTTTTGGGGGAAGACCGGGTTCTGTTTCAATTCCACCCAGACACCCCGCTTTTCCCTATGCTGGTCAACCTTCACCAAGATCTCAAGTCCCACAAATGGGTATGAGGAATTTCATTCCTTCCCCTCAAATGCCAAACTTACTCAGTCCTGGTGCCCAAAGAGGTATGCACAATCGACAAAGCTATCCTGCTCAGGGAACATGGCCAGATATTCCGATGAGTCAGAAATTTGGCAACAATCCCTCCTTGGCGTCCAATAGGCCAGCATATTCTGCTGACCAAATTTATGATCCCTTTTCACCAACATCTGTTGCACCTCCGCACCAGAAAGGTAATCCTGGAAAATGA 2289 0.4522 MTAKFDWTPASEPHKMSGATSTAPSSSQKLSKFGAKSGFVIPKNKLLGSLVPILRGAKKDGVTGVINEESPKQIERKSRWGPDPTQDASVKRAKVLALQIRVDQISKQLESENLEIGGAQNSSLVDENPDESKSGSQTNSKSEMLELEKREAIGEILKLDPSYKPPPGFKLLLKEDSLPLPVHEYPGYKFVSLIYGPEGDNQKRLEKETGTKIKIHGTKADTEEKGEIKPGTDVQCSYKEMHVKISADSFDKVDAAISIIELLISSVTGNSAADSTSVSVSGDNTNVPNQNQDALPSHAISLSQENQDVFQSAANTQMQGDRFQYSGSWFSAVHTPLFASSGSVVPPNPPHLARNPHFPPQRMSPSSMISAFGAQPAPVAGFHPIIPNQQFSMQAPPPTQIFQHSQWTQTTPFGHVGPPRNPSVIPAQNLTAPTNASISFPASFSQSQPTPTGQLQTLTPHGVSSELSGGPVNVKISVGLSNMGSMAPQAVPPKRLVSLGPQPDVPQPNMSVMPRPGSIHPHHAGMSPRPSSSVGPIPGTVHSTGNHLSGPRMPNSASHYTHVKPLASMPSNSGNFTFQGQRPNADYYQAVPRPNNQATTQGGSQEPPSGPRPPPFGFSVPDQPLQSFQRTQVPNQVDPTQAYVSAAPFGGRPGSVSIPPRHPAFPYAGQPSPRSQVPQMGMRNFIPSPQMPNLLSPGAQRGMHNRQSYPAQGTWPDIPMSQKFGNNPSLASNRPAYSADQIYDPFSPTSVAPPHQKGNPGK* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4572 762 MobiDBLite consensus disorder prediction 14 29 - -
Tpr2g4572 762 MobiDBLite consensus disorder prediction 118 145 - -
Tpr2g4572 762 MobiDBLite consensus disorder prediction 712 736 - -
Tpr2g4572 762 MobiDBLite consensus disorder prediction 60 88 - -
Tpr2g4572 762 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 176 269 IPR036612 GO:0003723
Tpr2g4572 762 SMART kh_6 172 265 IPR004087 GO:0003676
Tpr2g4572 762 PANTHER RNA-BINDING PROTEIN RELATED 23 757 IPR045071 -
Tpr2g4572 762 Gene3D - 89 166 - -
Tpr2g4572 762 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 23 757 - -
Tpr2g4572 762 MobiDBLite consensus disorder prediction 712 762 - -
Tpr2g4572 762 Pfam KH domain 189 260 IPR004088 GO:0003723
Tpr2g4572 762 Gene3D K Homology domain, type 1 170 300 IPR036612 GO:0003723
Tpr2g4572 762 MobiDBLite consensus disorder prediction 118 142 - -
Tpr2g4572 762 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4572 K13095 - gmx:100777227 855.899