Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4571 ATGGTTTCCAACAAAAGGATAACTGCATTATTACTTCTACTGTTGGCTTGTTTTGCAAACTCAGATTTAACAAAAGACAGAGATGAATGTGCTGACAAACTTGTTACACTTGCTAGTTGTCTTCCTTATGTTGGTGGTGATGCCAATACTCCTGCTATAGATTGCTGCACTGCCCTTAAAATAGTCCTTGATAAGACCAAGAAATGCATCTGCATCCTCATCAAAGATCGCAATGATCCTAAACTTGGCTTCACTTTGAATGCTACTCTTGCTGTTCAGCTTCCAAATGCTTGTCACATACCATCTAATATATCTCAATGTGTAGATCTTTTGCATTTGTCACCTAAATCACCTGATGCTAAGATATTTGAAGGACTTGGAAATTCTACCAAAACAAACAGTTCCACACCAGTTTCAAGTGGTTCTGTTGTGAAGGGACCAAACTCAAGTTCTGAGGAAAAGAGTGGTGGTGGGTTGAGAAAGAGGTGGTTGGTGGCAGAAGTGGTTTGTGCCATTTTACCATTTGTTTTCATATATCTCACTTCTTCATTTTAG 555 0.3892 MVSNKRITALLLLLLACFANSDLTKDRDECADKLVTLASCLPYVGGDANTPAIDCCTALKIVLDKTKKCICILIKDRNDPKLGFTLNATLAVQLPNACHIPSNISQCVDLLHLSPKSPDAKIFEGLGNSTKTNSSTPVSSGSVVKGPNSSSEEKSGGGLRKRWLVAEVVCAILPFVFIYLTSSF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4571 184 SMART aai_6 30 107 IPR016140 -
Tpr2g4571 184 Pfam Probable lipid transfer 24 107 IPR016140 -
Tpr2g4571 184 MobiDBLite consensus disorder prediction 131 153 - -
Tpr2g4571 184 Gene3D - 27 111 IPR036312 -
Tpr2g4571 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 108 IPR036312 -
Tpr2g4571 184 CDD AAI_LTSS 37 100 - -
Tpr2g4571 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 8 179 IPR043325 -
Tpr2g4571 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Tpr2g4571 184 PANTHER PROTEASE INHIBITOR/SEED STORAGE/LTP FAMILY PROTEIN 8 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4571 Tpr-Chr2 50573068 50574552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4571 7 173 Acyl Lipid Metabolism Gene Families AT1G55260 44.379 3.33e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4571 - - pvu:PHAVU_001G268300g 238.039