Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4559 ATGTGGACGAACGTTTTCAAAATTGGTAGTCTACATCAGATATCATGGTTTCAATTTCTCCCCCACGAACCTGATCTGAACCCTCTACCTGACAAAAGTGTAAAAGCGGACCAGAAGGATGCTGCAATGTTGCTGGTGCTTTCATCACATCTGCAACTACAGAAGGAAGGTTTTCTCAGCGCATGGACCAATTCCTTTGTTGGACCCTGGGATCCATCTCAGGGTTTACATAATCCTGATGAAAAGATTAAGCTGTGGCTTTTTCTTCCAGGGCGTCATTCATCAGTTTCTGAAACTGCTCAGCCAGCATTATCCGGATTAAGAGTTGTTGCGTCTGGGCTCTGGGTTGCTCCTGGGGATTCAGAAGAGGTTGCTGCTGCTCTCTCTCAGGCTTTAAGGAATTGCATAGAAAGAGCACTGCTTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGGTCCATCAATTTCAAAGTGAAGAACTGCTCAGGAGAGGACACCCTGCATTTGAGTTTGTCTTTGCTGCAACAGAGGAGGCAATCTTTGTACATGTTATAGTGTCCTCAAAGAATATCCGGATGCTTTCCACCGGTGATCTAGAAAAACTATTGAAACATTCTACGGAGACAACATATAGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCCTGACTGGCTGTTCATCAAGTGATCTTGTCAAGCAAAGTTATTTCAGTTCTTCCAAATTTAGGGTGTCAAATGGAATTATAGGCCTCCCATATCACATTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTTTGTTGAAGTGAGCCTTGGCTTCCCTAGATCTGAAACTGACAAGGCATTGCAGTCAAACAAAAATCTTGTTAGGAATTTACCCAAATCTCCTGTCACGGGACACAGTGACCACAAGGGATCACCAGATCATTTGTCAGATAATGAGAAAACATTTCTCTATCCAGCTGAGTCAGTTCTTGTACCAGTTTTTCAAACATCGTTAGCTAGGTCTTCTTTGAGAAGGTTTTGGCTGCAGAATTGGATGGGTCCATCCCTGACTGGTTCCTCATCCTTTATTCACTGTGCTGGTAATGTGGAATCTACTGACGATCCTTGGAATGAATACAATGGATCCCGAACTCAAAATAGTTATGATAGTAGTAGCAATAGCAACAATAGCAGTATCAGTAGCTTAAGTGCCAGCTCTAGTGATAGTGATTACAAGATTAAAGGACCAAATGAACTAGAGGCAGATGCTGATTCTTTAGCGTGTAGACAATCTATGATGTCTTCCGCCGATCGGTTGGGAAGTGATGGCCCCAAATTGGGCTCTAAACGGTCTCGAACAGGAGTTACACAGTTATTAAGTACGGCTACAAATATTCCTGGGCAAGATGCATACATGTCTGATTTTGGTTCCATGGAAGTTAACAATTCTGTCATTACAAGTTTTGATGAGCCAATTGGGTCTTACTGGGACTGGGGTGATGAGGAGAATAAAGGCTTGGTAATGGATATTGGAGCTCTTTTATCCGAGTTTGGTGGTTTTGGTGACTTCTTTGAAAGTGAAAAATTGCCTTTTGGAGAGCCCCCAGGAACTGCTGAATCTCAGGCACTTGTGTTGTCTGCCCCGGATTGTGGAGATTTTAACAGCAGTCCAGTTGGTACCAATGTGATGGATGTTTCAGATCAAATTCTTTTGCCTGTTGGGTTTTCTTCCTTTGAGAGCTTTAATCCAACTCCTCCAGCACTCATGGAGGAATGTCTTAACAAAGATCAAGATAACTTGAATAACTCCATGTCAATGGATCCAACTAACGAAACTCAAATGTTGTATACAGGGGAGTTTGATCATATAATTAAAGCTGAAGCAATTATGACATTTGCTCCTGAATTTGGAGCTGTTGAGGCCCCTACTAGTGGGTTATCCACAACATTATTCAGAAGCCCATATTTTCCAAGTTCTCGAAAAGCAGAGAGTTCAAATTCTTGTTCAAACAATTACTTGTATGGCGCAGAGCCACCTTCTTCTCCCTATATTGAAGGATCAGATGGGAAGAATGGACTGGTTATTAATACAAACACATGTTCTGGAAAACATGATACAAGTATGACTCTCCACTCAAAAAATTACTATACTTTTGTGGAGAGTAGGAAAGACATAAATGACAAAAAACCAGTTGCATGTATTGTTAACAGCATTGCTAAATCTGAGGGGACAGTACAACCTCCGTTCTCGAATATTGGTTCTAATGCCTCTGTCAAGTCCGGTTTAAGGAAGATGACTGAAGGCACAAAGGACGCAGAGCATTTCACTCTATCTGCAAAAACTTTATTGGCAACTGATGTTACCTGTGCTATGTTGCAAGCTTCCATGTGCAGGTCACGACACACTCTCTTATCTTCTGGTAACAACCTCATTCCTGTTGGTTTGAATAGATCCACCGGGGTTACATTTTCTAATCAGCTTCCTACTGACCCGAGTACCACCACAGACAACATATCTGGCAAGTACGAGGTGAAAAAGAAAGAAAATATACCGGTTCGGATTGCAGGTGATATTGATGGAGTGCTTGATGGGCATCTCAATGCACCTGCACCTGTTGGTGTTTGGCGCTCTGTAGGAGCTTCAAAAGTCGTAAAACCTTCCAATTCACCAAACGTGGAAGTTGGTCCTTCCTTTTCCCATAATTCATTCAATGAAGAAGGCATCCTTTCTTATGTTCAAAGAAAACCCCTTCAGGAGCTTCTTGATGGTATTGCATTGCTTGTCCAACAAGCTACTTCCTTTGTGGATCTGGCCTTGGATGCTGATTGTGGTGATGGTCCTTATGGTCTGCTTGCTTTGCAAGAACAGTGGAGGCGTGGGTTTTGTTGTGGGCCTTCAATGGTCCATGCTGGTTGTGGGGGAACTCTTGCCTCTTCTCATTCACTGGATATTGCTGGCTTGGAGTTGGTGGATCCACTTTCTTCTGATCTTCATGCATCTACTGTGATCAGTTTGTTGCAATCTGACATAAAAACAGCTTTAAAGTCGGCGTTCTCCAATTTAGAAGGACCCTTATCTGTGACTGATTGGTGCAAAGGACGCAACCAATTAGGTGATACTGGGAGCATAGTTGATGGAGTTTCTGCAGAATCCAGCATTAGTGAATGTAGGGATTCTTCAGAACCATTGAGTCCATCCCAATCATCTGTTTGTGGATCATCCAGTTTTAAAGTTTCTAGCATGATGGATAGTGCCAAGGCGGATGATTCCCAAAGGAGATCTGCTCAAGATATGTGCAATTCAGAATCAGAGCAGCAACCGTGTTCCCGGCTCAAACCTACACTCATTGCGGTTCCATTTCCTTCGATACTTGTAGGGTATCAGGATGATTGGCTCAAGGCATCGGCAAACTGTCTGCAGCACTGGGAAAAGGCTCCTCTAGAACCTTATGCTCTGCAGAAACCTATTACATATCATGTTGTATGTCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTCTATGAGATGTGCAAGCTAGGTACTCATTCACCTCTGATCTTGGGGAATCAGATGGAGATAGAGTCTGCGAAGTCATCATCTTGTGGTTTTGTTTTACTTGACTGTCCCCAATCAATGAAGATTGAGAGCAGCAATGCATCTCTGGTTGGGTCAGTAAGTGATTATTTTTTATCTTTATCGAATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCGAAGGCGCTGAGAGCTTTAAACCTGAGCTCTTGTTTTTCTGCGAACCCCGCTGAAGGAAGTAACAGTTCATGTTTGGTAATCTATGTGGTCTGCCCGTTTCCTGATCCGTCGGCAATTTTGCAAACTGTTACTGAATCATCTGTTGCCATTGGATCAGTTATCCAACAGTCAGATAGAGAGAGGAGATCTAGCTTGCATAATCAGGTTGTAAAGGCATTGAGTGGTTTGGCAGCTGTTGATGAAGCTTCAGCATCTAATATTCCTGTGCTTTCTGGGTTTAGTATTCCTAAATTGGTCTTGCAGATAGTTACAGTTGATGCCATTTTCAGAGTCACAAGTCCATCAGTGAGTGAGCTTGTCATTTTAAAAGAGACCGCCTTTACTGTGTACAGCAAGGCTCGCCGCGTTTCACGTGGCATCTCTAGTGATTCATCTCAATTGGCATTTTCTAGTAGATCTCAGTCTGTTTTGCCACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTTGGTCCTCGGATGGCAGGACATTCTCTTCCAAGAGAGAGTGACATTGATACTAGCTTGAGACCTGGTACTTGGGATAATTCTTGGCAACCGACAAGGTCTGGGGTTCTGAACTGTGATCCAAGTAGAACTGGGGATATCTTTCCTCATGATGAAATTCGCTACATGTTTGAACCCCTTTTTATTCTTGCTGAACCAGGTTCTCCAGAACATGGTATTTCAGTTATTGGTAGCCCCAGTTCAGAAGCTTCCAAGGCACTGGCAGATGATAGTAGTGGTAACCATGTGCAGAGTGCAAGTACAGCTGGGAGTGTGGATTCTGCTTCAAGCATCGATGGATCTGGGTCTGATCAAAAGACTCATCCAAGCTTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAAGGGAGAATTGCTTGACTCTAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAAGGTCTACAGTGCCTTTTTGTTCAAGTTCTTCAGCAAGGTTGTGTAATACTTCAATCTTGTGATCCCAGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTCTATGAGCTCGAGTACCTTGAGTGGCAGAAAGCCATTTATTCAGCTGGTGGATCTGAGATGAAGAGATGGCCCCTTCAACTCCGTAAGTCTCTGTCGGATGGAGTGTCATCAACTAGTAATGGTTCTTCTTTGCAACAATCAGATATGAGTTTGATGCCAGAGAGAACTCTTCCTTCCTCCCCTAGTCCTTTGTACAGCCCTCATCCCAAACCAACTGGTTTTATAAAAGGCGGTTTAGGGCAATCTGCTTCCAGAAAGCAGATAATGGGTGGACATTCTATGGTTGACAGTTCAAGGGGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAATTTCTATGGACCATACGCTACAACCAGTTATCCCAGCCGATTCATCATCTCCTGGTTATGTAGAAGGTTTCACTCCAGTGAAGTCTCTCGGTTCTACATCTTCTGCATATATTTTAATTCCTTCTCCCAGCATGCGGTTCCTTCCTCCAACATCTCTTCAACTCCCCACATGCCTCACTGCCGATTCTCCGCCTCTAGCTCATTTGCTTCACAGCAAGGGTTCGGCTCTTCCGCTCTCCACAGGATTTGTGGTTTCAAAAGCAGTTCCTTCCATGAGGAAGGACTATAGGAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATAGATTATTATGGAGGTTCTAACATCCCCCAAGAGAAGATTGTTCGAGGAATTAACAAGCAAGGTGGTAGAGGTTTGAGCTGGGAAGCTAAAGATTTTGAAACGGAGTCACACTTGATTCTAGAGTCCCTTGCAGCAGAGCTTCATGCCTTGTCATGGATGACAGTCAGCCCCTCATACCTAGAACGACGAACAGCACTTCCGTTCCATTGTGACATGGTTCTAAGACTAAGGAGACTTCTTCACTTTGCCGATAAAGAGCTCTCCAAACAGTCAGAGAAATCTTGA 5859 0.4361 MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKADQKDAAMLLVLSSHLQLQKEGFLSAWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVSETAQPALSGLRVVASGLWVAPGDSEEVAAALSQALRNCIERALLGLYYMRFGDVFSKVHQFQSEELLRRGHPAFEFVFAATEEAIFVHVIVSSKNIRMLSTGDLEKLLKHSTETTYRLPVIVSPHGIRGSLTGCSSSDLVKQSYFSSSKFRVSNGIIGLPYHISQGVGCQLRGQNCFVEVSLGFPRSETDKALQSNKNLVRNLPKSPVTGHSDHKGSPDHLSDNEKTFLYPAESVLVPVFQTSLARSSLRRFWLQNWMGPSLTGSSSFIHCAGNVESTDDPWNEYNGSRTQNSYDSSSNSNNSSISSLSASSSDSDYKIKGPNELEADADSLACRQSMMSSADRLGSDGPKLGSKRSRTGVTQLLSTATNIPGQDAYMSDFGSMEVNNSVITSFDEPIGSYWDWGDEENKGLVMDIGALLSEFGGFGDFFESEKLPFGEPPGTAESQALVLSAPDCGDFNSSPVGTNVMDVSDQILLPVGFSSFESFNPTPPALMEECLNKDQDNLNNSMSMDPTNETQMLYTGEFDHIIKAEAIMTFAPEFGAVEAPTSGLSTTLFRSPYFPSSRKAESSNSCSNNYLYGAEPPSSPYIEGSDGKNGLVINTNTCSGKHDTSMTLHSKNYYTFVESRKDINDKKPVACIVNSIAKSEGTVQPPFSNIGSNASVKSGLRKMTEGTKDAEHFTLSAKTLLATDVTCAMLQASMCRSRHTLLSSGNNLIPVGLNRSTGVTFSNQLPTDPSTTTDNISGKYEVKKKENIPVRIAGDIDGVLDGHLNAPAPVGVWRSVGASKVVKPSNSPNVEVGPSFSHNSFNEEGILSYVQRKPLQELLDGIALLVQQATSFVDLALDADCGDGPYGLLALQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSSDLHASTVISLLQSDIKTALKSAFSNLEGPLSVTDWCKGRNQLGDTGSIVDGVSAESSISECRDSSEPLSPSQSSVCGSSSFKVSSMMDSAKADDSQRRSAQDMCNSESEQQPCSRLKPTLIAVPFPSILVGYQDDWLKASANCLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYEMCKLGTHSPLILGNQMEIESAKSSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRALNLSSCFSANPAEGSNSSCLVIYVVCPFPDPSAILQTVTESSVAIGSVIQQSDRERRSSLHNQVVKALSGLAAVDEASASNIPVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYSKARRVSRGISSDSSQLAFSSRSQSVLPQMPSPISGMWKDCVGPRMAGHSLPRESDIDTSLRPGTWDNSWQPTRSGVLNCDPSRTGDIFPHDEIRYMFEPLFILAEPGSPEHGISVIGSPSSEASKALADDSSGNHVQSASTAGSVDSASSIDGSGSDQKTHPSLHCCYGWTEDWRWLVCIWTDSKGELLDSNIFPFGGISSRQDTKGLQCLFVQVLQQGCVILQSCDPSLAKPRDFVIARIGGFYELEYLEWQKAIYSAGGSEMKRWPLQLRKSLSDGVSSTSNGSSLQQSDMSLMPERTLPSSPSPLYSPHPKPTGFIKGGLGQSASRKQIMGGHSMVDSSRGLLHWAQSISFVAISMDHTLQPVIPADSSSPGYVEGFTPVKSLGSTSSAYILIPSPSMRFLPPTSLQLPTCLTADSPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSVLSVSLIDYYGGSNIPQEKIVRGINKQGGRGLSWEAKDFETESHLILESLAAELHALSWMTVSPSYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS* 1953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4559 1952 MobiDBLite consensus disorder prediction 291 318 - -
Tpr2g4559 1952 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1945 - -
Tpr2g4559 1952 MobiDBLite consensus disorder prediction 1669 1692 - -
Tpr2g4559 1952 MobiDBLite consensus disorder prediction 387 413 - -
Tpr2g4559 1952 MobiDBLite consensus disorder prediction 1513 1545 - -
Tpr2g4559 1952 Pfam Mediator complex subunit 13 N-terminal 2 335 IPR021643 -
Tpr2g4559 1952 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1945 - -
Tpr2g4559 1952 Pfam Mediator complex subunit 13 C-terminal domain 1547 1931 IPR009401 GO:0003712|GO:0006357|GO:0016592
Tpr2g4559 1952 MobiDBLite consensus disorder prediction 1085 1109 - -
Tpr2g4559 1952 MobiDBLite consensus disorder prediction 1669 1699 - -
Tpr2g4559 1952 Pfam MID domain of medPIWI 1276 1393 IPR041285 -
Tpr2g4559 1952 Pfam MID domain of medPIWI 1157 1272 IPR041285 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4559 Tpr-Chr2 50416707 50437776 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4559 K15164 - gmx:100782017 3235.28