Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4525 ATGGCGTTGAAGTTGAAGGATACATTTTACATATCACATGGATCACCAACGTTGTCAATAGATGAATCAATTCAAGCAAGAAAGTTTCTACAATCATGGAAGAAAGATGTGTATCAAGAGAAACCTAAATCTATTTTGATTATTTCTGGTCATTGGGACACCACCGTACCAACCGTTAACGTTATTCAAACAACCAATGATACCATCTATGACTTCTATGGTTTTCCCAAACCCATGTACCAGCTCAAATATCCAGCACCTGGAGCTTCACATTTAGCCAAAAGGGTGAAGGAACTACTGAACAAATCCGGTTTCAACCGCGTCAACGAAGACAAAAAGAGAGGACTTGATCATGGTGCTTGGGTTCCACTCATGTTAATGTATCCAGAAGCTGATATCCCAGTTTGTCAACTTTCTGTTCAATCTAATTTAGATGGAACTCATCATTATAACATTGGAAAAGCATTGGCTCCTCTTAAAGATGAAGGTGTGTTGATAATAGGTTCTGGAAGTGCTGTTCATAATTTGAGAGCACTTGACTTCAGTGCAGGTGAAGAAGCTACTCCTTGGGCCTTAGAATTTGATAATTGGTTGAAAGATGCTCTTCTTGATGGAAGATATGAAGATGTAAATCATTATGAACAAAAGGCACCACATGCAAGAAAGGCTCATCCACATCCAGATCACTTTTTTCCATTGCATGTTGCTATTGGTGCTGCTGGTGAAAATTCAAAGGCCAAACTTATCCATAGCAGTATTGAAGTTGGCACTCTATCTTATGCCTCTTACCAGTTTACATCAGATTCAAGCTAA 813 0.3887 MALKLKDTFYISHGSPTLSIDESIQARKFLQSWKKDVYQEKPKSILIISGHWDTTVPTVNVIQTTNDTIYDFYGFPKPMYQLKYPAPGASHLAKRVKELLNKSGFNRVNEDKKRGLDHGAWVPLMLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIIGSGSAVHNLRALDFSAGEEATPWALEFDNWLKDALLDGRYEDVNHYEQKAPHARKAHPHPDHFFPLHVAIGAAGENSKAKLIHSSIEVGTLSYASYQFTSDSS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4525 270 Gene3D - 2 266 - -
Tpr2g4525 270 PIRSF Doxgns_DODA 1 267 IPR014436 GO:0008270|GO:0016701
Tpr2g4525 270 PANTHER EXTRADIOL RING-CLEAVAGE DIOXYGENASE-LIKE 4 267 - -
Tpr2g4525 270 PANTHER UNCHARACTERIZED 4 267 - -
Tpr2g4525 270 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 265 IPR004183 GO:0006725|GO:0008198|GO:0016491
Tpr2g4525 270 CDD 45_DOPA_Dioxygenase 8 265 IPR014436 GO:0008270|GO:0016701
Tpr2g4525 270 SUPERFAMILY LigB-like 8 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4525 Tpr-Chr2 49932559 49935575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4525 K15777 - gmx:100798236 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4525 2 49932559 49935575 Tpr2g4525 2 49932559 49935575 ECH