Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4484 ATGAGTTTCGCCGCATACAAGATGATGCAATGGCCAACCGGCGTAGACAATTGCGCCTCCGGTTATCTCACTCACTCCCGTTCCGATTTCACACCTCGTATTCCATCTCTTCAACCCGACGACGATCTTGACTCCGATTGGGTCTCACAACCTCCTGACCTTGCTCCTGTTCCCAATCTCGTCATTACTGCTGCTAATATTCTTGAAGTTTACATTGTTCGTCTTCAACATGATCCTCCTAAGTCTTCTTCTTCTGATTCTCGTGTTCTCGATGGGATTGCCGGTGCTTCGCTTGAACTCGTTTGTCATTACAGGTTGCATGGTAATGTTGAAAGCGTGGCTGTGTTGAGTGTTGGGGGTGGTGATGCTTCTAGGAGGCGAGATTCTATCATCTTAACTTTTAAAGATGCAAAGATTTCAGTTCTAGAGTATGATGATTCTATCCACGGACTTCGTACCAGTTCTTTGCATTGTTTTGAGGGTCCAGAATGGCTTCATTTGAAAAGAGGTAGAGAACAATTTGCTATAGGTCCGGTGGCAAAGGTTGATCCTCAAGGAAGGTGTGGTGGAGTTCTTGTCTATGATTTGCAAATGATAATATTAAAGACTACTCAGGCTGGTTCTGGTTTAGTTGGGGAGGATGATGTGTCAGGTTCTGGAGGTTCAGTTGCTGCTCGTATCGACTCATCTTATATGATAAATTTGCGTGACTTGGATATGAGGCATGTAAAAGATTTCACATTTGTTCATGGCTATATCGAACCTGTCATGGTCATCTTACATGAACGTGAGCTTACTTGGGCTGGGCGTGTCTCATGGAAAAATCATACTTGCACGATATCAGCACTTAGCATAAGCACAACTTTGAAGCAGCATCCACTTATTTGGTCAGCTGTTAATCTCCCCCACGATGCCTACAAGCTTCTTGCAGTGCCCTCGCCAATTGGTGGTGTTCTTGTCATTGGTGCGAACACTATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCCTTGAACAGCTATGCTGTTTCGCTTGATAATAGTCAGGAGATGCCAAGATCAAGTTTCAATGTGGAACTTGATGCTGCCAATGCAACTTGGTTAGTGAATGATGTAGCCTTGCTGTCAACAAAAACCGGTGAACTGCTATTGCTTACTCTTATTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTCTATCATCTGGTATTACGACAATTGGAAATTCTATGTTTTTTCTCGCTAGTCGATTAGGAGACAGTATGCTGGTGCAATTTTCATGTGGATCGGGTGTTTCAATGTCGTCGTCCAATCTAAAAGAAGAGGTTGGTGATTATGACGTAGATGCTCCTTCAGCAAAGAGATTGCGGAGGTCACCTTCTGATGCTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCCTTGTATGGATCTGCTCCAAATAGAACAGAATCAGCACAGAAATCTTTCTCGTTTGCAGTGAGGGATTCATTGATAAATGTTGGTCCTTTGAAAGATTTTTCGTATGGTTTAAGAATAAATGCTGATGCAAATGCTACAGGGATAGCCAAACAAAGTAACTATGAATTGGTGTGTTGTTCTGGTCATGGAAAGAATGGTTCTCTGTGTGTTCTTCGGCAATCCATTCGTCCGGAAGTGATTACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAGCACACGCTCAGTTAATGCTGACTCATCTAAGCTGGCTGATGATGAAGATGAATATCATGCGTACCTTATTATAAGTTTGGAGTCACGTACTATGGTACTAGAAACAGCTGATCTTCTGAGTGAAGTTACCGAAAGTGTTGACTATTATATTCAAGGAAAAACACTTGCTGCAGGGAATTTATTTGGAAGACGTCGAGTTATTCAAGTCTACGAACGTGGTGCTCGAATTCTGGATGGTTCTTTTATGACCCAAGATGTAAGCTTTGGAACTTCTAACTCTGAATCTAGTTACGGATCTGAGAGTGCTTTGGCACTATCTGTTTCTATAGCTGATCCATATGTCTTGCTCAGAATGAGTGATGGAAGTGTTCGACTTTTGGTTGGAGATCCTAGCACCTGCACCATTTCTGTCACTTCTCCAGCTTCATTTGAGGGATCAAAGGGATCGGTTTCATCATGTACACTCTACCATGATAAAGGACCTGAACCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACCGGGGTTGGTGAGGCCATTGATGGCACTGATGGTGCGGTTCAGGACCATGGGGATGTTTATTGTGTTGTATGTTACGAAAATGGCAACCTTGAAATATTTGATGTACCCAATTTCAGCTGTGTTTTTTCCGTGGAAAATTTTCTGTCTGGAAAGAGCCACCTTGTTGATGCTCTGACAAAAGAGGTGCCAAAAGATTCTCAAAAGGGGGATAAGGTTTCTGATGGAGTGGTCAGCCAAGGCAGGAAGGATGCCCTGAATATGAAGGTTGTGGAGTTGGCCATGCAGAGATGGTCGGGAAAGCATAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAACTCTTTGTTACCATGCTTACCTTTATGAAAATCCAGACGGCACTTCTAAGGTTGAGGATTCAATATCAGCTGGTGGGCCTATTGGCCTTAGCAATACTAGTGTTTCTAGGCTTAGAAATTTGAGATTTGTTCGTGTGCCCTTGGATGTACATGCCAGGGAAGAGACATCAAATGCATCACCTTGTCAACAAATTAATATTTTCAAGAATATTGGTAGTCATGAAGGATTCTTCCTATTGGGGTCAAGACCGGCTTGGGTAATGGTGTTGAGAGAACGGCTTCGTGTTCATCCACAGCTATGTGACGGGTCTATTGTTGCTTTCACCGTCCTTCACAATGTAAACTGCAATCACGGCCTCATATATGTTACATCACAGGGTGTTTTAAAGATATGCCAACTGCCTTCTGGCTCAAACTATGATTGCTACTGGCCTGTACAGAAAGTTCCTCTTAAAGCTACTCCACATCAAGTAACTTACTATGCAGAGAAGAATTTGTATCCGATTATTGTTTCATTTCCTGTTCCTAAACCACTAAATCAAGTCATTACTTTAGTTGACCCAGATGCTAACAATCTAACTGAGAATCAGAATTTGAATTCTGATGAGCAAAACCGCTTTTATAGCATTGAAGAATTTGAGGTCCGTATTATGGAGCCAGAGAAGTCTGGCGGCCCTTGGCAAACAAAGGCAACAATACCCATGCAAAGTTCTGAAAATGCTCTCACTGTTAGGATGGTTACACTGATGAATACATCGTCAAAAGAAAACGAAACACTTTTAGCCGTTGGTACTGCTTACGTGCAAGGAGAAGATGTTGCTGCAAGAGGGCGTATACTCTTGTTCTCTTTGGGGAGGAATACTGATAATCCACAAGATCTGGTTTCAGAGGTGTACTCAAAGGAATTAAAAGGTGCTATATCTGCCATGGCCTCACTTCAGGGTCATCTATTAATTGCATCTGGTCCAAAAATTATCCTTCATAAGTGGACCGGCACTGAGTTGAATGGTGTTGCATTTTTTGATGTGCCACCACTGCATGTTGTGAGCTTAAATATTGTAAAGAACTTCATCCTTATTGGCGACATCCATAAAAGCATATATTTTCTTAGTTGGAAAGAGCAGGGTTCTCAACTTAGTTTGTTAGCCAAGGATTTTGGTTCTCTTGATTGTTTTGCTACAGAATTTTTGATTGATGGAAGTACTCTGAGTCTCATGGTTTCAGATGATCAAAAAAATATCCAGATTTTTTACTATGCACCAAAGATGTCTGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCTGAATTTCATGTCGGGGCACATGTGACTAAATTCTTAAGGCTGCAGATGTTATCTACTTCTGGTCCAGGCTCAGATAAAACCAATCGTTTTGCCTTGTTATTTGGTACATTGGATGGTAGTATTGGTTGCATTGCTCCTCTTGATGAAATCACATTCCGTAGACTGCAGTCTTTACAGAAAAAGCTCGTTGATGCCGTTCCCCATGTTGCTGGCCTAAATCCAAGAGCTTTCAGATTGTTCCATTCAAATGGAAAGGCCCATCGACCAGGTCCCGACAGTATAGTTGACTGTGAGCTGCTATGCCATTATGAAATGCTTCAATTGGAGGAACAGCTTGAAATTGCTCACCAGGTTGGAACAACTCGATCACAAATTCTCTCAAATCTAAATGATCTGTCTCTTGGAACAAGCTTCTTGTGA 4338 0.4212 MSFAAYKMMQWPTGVDNCASGYLTHSRSDFTPRIPSLQPDDDLDSDWVSQPPDLAPVPNLVITAANILEVYIVRLQHDPPKSSSSDSRVLDGIAGASLELVCHYRLHGNVESVAVLSVGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFAIGPVAKVDPQGRCGGVLVYDLQMIILKTTQAGSGLVGEDDVSGSGGSVAARIDSSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKNHTCTISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVSLDNSQEMPRSSFNVELDAANATWLVNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLSSGITTIGNSMFFLASRLGDSMLVQFSCGSGVSMSSSNLKEEVGDYDVDAPSAKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSVNADSSKLADDEDEYHAYLIISLESRTMVLETADLLSEVTESVDYYIQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGTSNSESSYGSESALALSVSIADPYVLLRMSDGSVRLLVGDPSTCTISVTSPASFEGSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAVQDHGDVYCVVCYENGNLEIFDVPNFSCVFSVENFLSGKSHLVDALTKEVPKDSQKGDKVSDGVVSQGRKDALNMKVVELAMQRWSGKHSRPFLFGILSDGTTLCYHAYLYENPDGTSKVEDSISAGGPIGLSNTSVSRLRNLRFVRVPLDVHAREETSNASPCQQINIFKNIGSHEGFFLLGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDCYWPVQKVPLKATPHQVTYYAEKNLYPIIVSFPVPKPLNQVITLVDPDANNLTENQNLNSDEQNRFYSIEEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLMNTSSKENETLLAVGTAYVQGEDVAARGRILLFSLGRNTDNPQDLVSEVYSKELKGAISAMASLQGHLLIASGPKIILHKWTGTELNGVAFFDVPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSGPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQKKLVDAVPHVAGLNPRAFRLFHSNGKAHRPGPDSIVDCELLCHYEMLQLEEQLEIAHQVGTTRSQILSNLNDLSLGTSFL* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4484 1445 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1434 - -
Tpr2g4484 1445 Gene3D - 55 446 IPR015943 GO:0005515
Tpr2g4484 1445 Pfam CPSF A subunit region 1083 1410 IPR004871 GO:0003676|GO:0005634
Tpr2g4484 1445 Gene3D - 972 1352 IPR015943 GO:0005515
Tpr2g4484 1445 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1434 - -
Tpr2g4484 1445 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 128 673 IPR018846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4484 Tpr-Chr2 49343717 49361982 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4484 K14401 - gmx:100785543 2530.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4484 2 49343717 49361982 Tpr2g4484 2 49343717 49361982 ECH