Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4462 ATGGCTTGGTATAGAAAGGGAAAGCTTGTTTTTGATGGTTTTCATAGATTGGCTCAATCAAGAGTTTCATCTCAAAATTCAATTTTGAAACCTAGTTCAAGAATTTCATCATCTGGGTATTTCAATTTGGGTTCTAAAGGTACAATCTTTAATGGCTTTTCATCGTTTTCTTCAATTTCTAAAAGATTAGAAACAAAGGGTTTTGAAGTTAATAAGAATTTTAGGAGATTTTACTATGTTGATCCTCGAAATGTGAAGCATTTTGCAACAAGAGGGCCAAAAGGTTGGTTTCAGAATCCTAGAAATATTATGATTGTTGTAGTGGTTGGTTCAGGTGTTTTTATTACTGTGTGTTTTGGAAATATGGAAACTGTTCCTTACACGAAACGAACCCATGTGATTTTGATATCGAATAAGTTGGAGAGGATGATTGGAGAGAGTGAATTTGAAAAGATAAAGGTAGCTTTTAACGGGAAGTTGTTGCCTGCAATGCACCCTGAAAGTGTGAGAGTTACAATGATAGCGAATGATATCGTTAATGCATTGAAGAGAGGGTTGAGTCAGGAGAATGAGAATGTATGGAGTGATTTAGGGTATGCTTCAGGAAATACTATGATGAGTGAAGAACATGGGAGGGAGACACTTAATGCATTGACTGAAAATGAAGGGAATGTTGAAGGGAATTGGCACCAGGAGGACTTGGTTCTTGATGATAAATGGGTTCAAAAGAGTAGGAAGAAGGGTGAGAAACGAGGGTCGAAGCCTTATACTTTGCATTTGGATCAATTCAACTGGGAGATTTTGGTGGTTAACGAGCCTGTTGTTAATGCATTTTGCTTACCTGGTGGGAAGATTGTTGTATTTACGGGTTTGCTAGAACATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTTGCACATGCTGTGGCCAGACACAGTGCTGAGGGGATCACAAAAAATCTGTGGTTTTTTATTCTACAATTGATACTTTATCAATTTGTCACGCCTGATGTTGTCCATACAATGTCATCACTTTTCTTACGGCTACCTTTCTCCAGAAGGATGGAAATAGAAGCTGATTACATTGGACTTCTATTAATTGCATCAGCCGGCTACGATCCACGCATGGCACCTAAAGTCTACGAGAAGTTGGGGAAAATCACTGGCGGTTCTTCTATGGTTCAAAACTATCTCTCCACTCATCCATCTGGAAAAAAGAGAGCAGAATTACTTGCTCAAGCTCAGGTAATGGAAGAAGCTGTTACTATATATAAGAATGTAAGATCTGGACGTGGAGTTGAAGGTTTTCTTTAG 1326 0.3831 MAWYRKGKLVFDGFHRLAQSRVSSQNSILKPSSRISSSGYFNLGSKGTIFNGFSSFSSISKRLETKGFEVNKNFRRFYYVDPRNVKHFATRGPKGWFQNPRNIMIVVVVGSGVFITVCFGNMETVPYTKRTHVILISNKLERMIGESEFEKIKVAFNGKLLPAMHPESVRVTMIANDIVNALKRGLSQENENVWSDLGYASGNTMMSEEHGRETLNALTENEGNVEGNWHQEDLVLDDKWVQKSRKKGEKRGSKPYTLHLDQFNWEILVVNEPVVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVAHAVARHSAEGITKNLWFFILQLILYQFVTPDVVHTMSSLFLRLPFSRRMEIEADYIGLLLIASAGYDPRMAPKVYEKLGKITGGSSMVQNYLSTHPSGKKRAELLAQAQVMEEAVTIYKNVRSGRGVEGFL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4462 441 Gene3D Metalloproteases ("zincins"), catalytic domain 257 320 - -
Tpr2g4462 441 Pfam Peptidase family M48 258 416 IPR001915 GO:0004222|GO:0006508
Tpr2g4462 441 PANTHER METALLOENDOPEPTIDASE OMA1 75 433 - -
Tpr2g4462 441 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 75 433 - -
Tpr2g4462 441 CDD M48C_Oma1_like 251 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4462 Tpr-Chr2 48994357 48999064 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4462 K23010 - gmx:100799127 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4462 2 48994357 48999064 Tpr2g4462 2 48994357 48999064 ECH