Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4370 ATGCAAGAAGAACATCGCCATCCCCATAATTTGGGCTCACAACAAGTGACACATGGTACGGTGGAACATCATGATGATCATGAGAAGAAGTCAGTTCTCAAGAAAGTGAAGGCAAAGGCTAAGAAAATTAAGGACACAATCACCAAGCATGGTCATCATGATGATCATGAACAAGGTCATGGTCATGATCAATATCATTATGAAAATCAACATATCCCTGATGACCATGACTTGGATGAAGAAGATGATGTTCATGACCCAGAAATCCATGGTGCACCAATTTATGACAGTGCTAAAGTTAGAAATGTGACACCAACTGGCAAAGTAAAAAATTCAGGTCAAGGAGTGAATTTTGGAAGCACAACTATTATGGGAGAAGAACATCATCATCATAATGAGCCAAGAGTAGTAGTTGTTAAATCAGCTACTGAAAATATTAATCAAAGTAGAATCAATGAGCCATCTAGAACATTTGTTAGGGAAGAGAGAACAATGGTGCAACCTAAGGTTAATTTGGAGGAAGATCCTCATGCACCAGGAAGTAGATTTCAAGCATATGCTCCAGCTAATTATCAAACCAAAGTCACTGATCCAACTGGGATAGGTGCTGCAGAAATGGACATTACTCCAATTCAAAAATCTATTGACAGAATGACTGTATACAATGAACCAATACCAACCCAACAACCAAAAACTCTTTCAACTATTTCTGAAACACAACAACACCCTTCCCCTTCTCTAGGAATCCACCACCAATTTTCTCCAGAAATTTCTGCACCAACCAAAACACCTTATCCATCATCAACCATAACACATCACCAAAATTTACCACAACAATCACCTGAAATCAAAACTCAATACCCTAAAAGCCATGATCAATTCACACCTGTTTTTTCTACTTCAACACAAACTCAACACCCTACTACTCATGACCAAAACTTGCCACATTTTTCTAGTGGAACAAGAACTCAATACCCTTCAGCTACAACCCATGATCATGTTACACCGTCGTTACTACCGACTGAACATAAACCTCAATTTTCCAATGCAACAAAAACTACTTCAAATTTACTACCAACTGAGCCTAAACCTTATCACTCTTCTACTATAAGTCATGACACATATCTGCCACCATCTTCCGGCGGCACATTTCTCCCAGGTGCGACAGAATCTAGATACCCTTTTGCTGGTAGCCATGATCAGTTTAAAACAAATTTGCTACCAACTGAGGCTAAACCACATCTCTCTTCTGCCACAATCCATGATCAATATGCGGCACCGTATTCTAGTGCAACTGAGCCTAATCTTCAGCACCAATCAGTTACAAGTTTGCCGCAACATTCAAGTGCAATGAAAACTCAGTATCCATCTGCTGGAAGCCATCTACCAACTGAACACCATTCTGCTACAAGTCATGGCCAATATATGCCACAGCATTCAGGTGGAATGAAAACTCAATACCCTTCAGCTGGAAGCCATGATCAGTTTACACCAGAGTTTTCTACCAACAACAGAAACATCACAGTTGAGGAACAACCTCAGCTACACCATGAATCAATGAAGAACTCATCAAACCAAAGCAACAACAGTTACACAGACAAAATCTACTCTGCAACTTCTGCAATCGCCGACAAAGCTGCAGATGCAAAAAATGCAGTCGCCTCGAAGCTGGGTTATGGTGAAAAAGGAGAAACAACAACTGGCGAAGAAGCACCGTTGAACCAGAGCAGTTACACAGATAAAATCTACTCTGCAACTTCTGCAGTGACTGGCACAGCCGCTGCTGCTAAAAATGCAGTTGCTTCGAAGCTTGGATACGGTGAAAAAGGTGAAACCACCACAACCAATGAAGCACCGTCTGACCAGAGCAGTTACACAGACAAAATCTACTCTGCAGCTTCTGCAGTCACTGACAAAGCCGCCGGTGCTAAAAACGCAGTTGCTTCGAAGCTTGGATATGGCGAAACACCATCAAACCAGAGTAGCTACTCATCTGCAACATCTGCAGTAGCACCATCGAACCAAAGTAGTTATACAGAGAAAATCTCATCAGCAACTTCTGCAATAGCTGATAAAGCTGCATCTGCTAAAAACACAGTAGCCTCAAAGCTCGGCTTTGGCGAGAAGAATGAGACCGAAACAAACTATGAAGAGAACAACAACAACAATGAGAAAAACGTTTCTTCTTCTTCAGTGTCACCTGCAGAATATGGAAAGAAAATTGCAGTTTCCTTGACAGAGAAGTTAGCTCCGGTATACGGAAAATTTGCTGGTGTAGGAACTGAAAGAGAAACTGGGGGTGTAGAACAGGATAAAGGGGTATCAATGAAAGAGTATATAGCTGAAAAATTAAGACCTGGTGAAGATGATAGAGCACTATCTGATGCAATTTCTGAGAGTTTATATAAGAAAAGTGTAGATGAGTCTGTGGAAGAGGTTTATCATAATGATGAAGGTAGTAGAGATGTGAGGAAAGTGGTTTCTGATGCTGTGCATAAGAGAGGTGATGATGAGGGAAGGAAAATGGAGAGGCCAAGAGGGAAAGTGACTGAGAGTGAAGAGGTGAAGAGAAGATTAGGGGGGTGGGATGAGGAAGTGAAAGAAGGTGACTTTGGGAAGGGTATGGTTGATATGGTTAAGGGTGTTGTTGGATCTTGGTTTGAAAAACCAGAGGAGAATGAATCTACTCAAGGAACAGGAGATTTGTCTAAGAACACTAGTGGAGAGGTTAGACAGGTTCATCAAACTGCAGGTGAAAGAAGACTACATGAGTCAACGAATTGA 2784 0.4131 MQEEHRHPHNLGSQQVTHGTVEHHDDHEKKSVLKKVKAKAKKIKDTITKHGHHDDHEQGHGHDQYHYENQHIPDDHDLDEEDDVHDPEIHGAPIYDSAKVRNVTPTGKVKNSGQGVNFGSTTIMGEEHHHHNEPRVVVVKSATENINQSRINEPSRTFVREERTMVQPKVNLEEDPHAPGSRFQAYAPANYQTKVTDPTGIGAAEMDITPIQKSIDRMTVYNEPIPTQQPKTLSTISETQQHPSPSLGIHHQFSPEISAPTKTPYPSSTITHHQNLPQQSPEIKTQYPKSHDQFTPVFSTSTQTQHPTTHDQNLPHFSSGTRTQYPSATTHDHVTPSLLPTEHKPQFSNATKTTSNLLPTEPKPYHSSTISHDTYLPPSSGGTFLPGATESRYPFAGSHDQFKTNLLPTEAKPHLSSATIHDQYAAPYSSATEPNLQHQSVTSLPQHSSAMKTQYPSAGSHLPTEHHSATSHGQYMPQHSGGMKTQYPSAGSHDQFTPEFSTNNRNITVEEQPQLHHESMKNSSNQSNNSYTDKIYSATSAIADKAADAKNAVASKLGYGEKGETTTGEEAPLNQSSYTDKIYSATSAVTGTAAAAKNAVASKLGYGEKGETTTTNEAPSDQSSYTDKIYSAASAVTDKAAGAKNAVASKLGYGETPSNQSSYSSATSAVAPSNQSSYTEKISSATSAIADKAASAKNTVASKLGFGEKNETETNYEENNNNNEKNVSSSSVSPAEYGKKIAVSLTEKLAPVYGKFAGVGTERETGGVEQDKGVSMKEYIAEKLRPGEDDRALSDAISESLYKKSVDESVEEVYHNDEGSRDVRKVVSDAVHKRGDDEGRKMERPRGKVTESEEVKRRLGGWDEEVKEGDFGKGMVDMVKGVVGSWFEKPEENESTQGTGDLSKNTSGEVRQVHQTAGERRLHESTN* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4370 927 MobiDBLite consensus disorder prediction 887 927 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 350 378 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 299 318 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 890 913 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 705 733 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 258 281 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 19 33 - -
Tpr2g4370 927 Pfam CAP160 repeat 630 654 IPR012418 -
Tpr2g4370 927 Pfam CAP160 repeat 536 560 IPR012418 -
Tpr2g4370 927 Pfam CAP160 repeat 682 707 IPR012418 -
Tpr2g4370 927 Pfam CAP160 repeat 583 607 IPR012418 -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 47 61 - -
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 613 663 - -
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 300 - -
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 664 911 - -
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 573 617 - -
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 477 569 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 716 733 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 429 493 - -
Tpr2g4370 927 MobiDBLite consensus disorder prediction 829 857 - -
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 573 617 IPR037491 GO:0009737
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 613 663 IPR037491 GO:0009737
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 300 IPR037491 GO:0009737
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 664 911 IPR037491 GO:0009737
Tpr2g4370 927 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 477 569 IPR037491 GO:0009737
Tpr2g4370 927 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4370 Tpr-Chr2 47530832 47535883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4370 - - mtr:MTR_6g045273 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4370 2 47530832 47535883 Tpr2g4370 2 47530832 47535883 ECH