Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4290 ATGAAAGCCTTGCATCCATTATTATTCTCTACAAGTATAGTACTATACTTCATACATCAAATATTAATTCACACAATGCATGAATATGAATATCCTTGTTGTGAGTATAATTTTTGGTTGTATCTAATTATGTGTCTAGTGATTGTGTCATTGGCAGGCATTACATCAGGCTTAGCTTTAGGAATATTGTCATACAATCCAGTTGATCTTGAAGTTCTCATTAAAGCAGGCAGACCAAAAGATAAAAAGAATGCAGAAAGGATTCAACCATTTGTAAAGAATGGACATTTTGTCTTGTGTACTCTTCTTCTAGGAAAATCATTGGCTATGGAGGCACTGCCAATTTTTATGGACACAATCATACCATCATGGTTTACTATTCTTATATCAGCACCATTGGTGACTGTATTTGCAGAGATTTTACCTCAAGCTGTATGCTCTAGATATGGACTTTCTTTTGGAGCAAAATTGGCTCCTTTTACTCATTTGCTTTTGTTGATCTTCTTCCCAATAACTTATCCAGCTAGTAAGCTGCTGGATTGGGCTCTAGGAAAAGAACATTCAGTTATTTTAAGAAGATCAGAGTTGAAGACATTTGTGGACTTGCATGCAGATCAGGCAGGGAAGGGTGGAGAATTGTCACATCATGAAACTTCTATAATCACAGGTGCTATGGATTTGACTCAGAAGACAGCTATAGATGCAATGACACACATATCTGAAACTTTTTCTCTTGATATAAATTCCAAATTAGACATGCATACAATGACACAAATAATGAGTAAAGGTCACAGTAGAGTACCTATTCATTCTGGCAATCCCAGAAATATTATTGGCCTCATCTTGGTTAAGAATTTAATCTTCTGCAGACCAGAGGATGAGACACCAATAAAGAATTTGATTATCAGGAAAATTCCTAGGGTATATGAAAGTTGGCCACTATATGAGATATTGAATCAATTCAAGAAAGGTCATAGCCATATGGCCGTTGTTTTGAAGGGAAAAATGGAAACAGAAAGCAATGAAGCTCATGCTGTGGATTCACCTATATTTTTGAATATAATAACTAATAAAGAATCAAACCAAGCTCAAATTAATATTGGAGAATCAAATTCTTCCTATGTACTGGAAATGAGTCAGAGAAGTTCAATTCCGGAATCAAGTGATGTGGAATTTCATAGTCCAACATTAGAAAATATGATGGTACTAGACAATGATGTTGGACAAGAATCAAAGCAATGGGATCAAGAAATTGGATGTATGACACATGAACAAATAATGTCTCTTAATTCTGGTGTTATGCATGATGAGGCTATTGGTATCATTACAATGGAGGATCTTATGGAGGAGTTATTACAGGGAGACATATTGGATGAAACTGATGAATATGTTCACCTTCAAAAGAACATTAGAATTAACCTGCAACAATCACATAGATCACAATCAAGATCATCAAGAAGAACATTTGGATCCAGTCGTCGTTGA 1485 0.3515 MKALHPLLFSTSIVLYFIHQILIHTMHEYEYPCCEYNFWLYLIMCLVIVSLAGITSGLALGILSYNPVDLEVLIKAGRPKDKKNAERIQPFVKNGHFVLCTLLLGKSLAMEALPIFMDTIIPSWFTILISAPLVTVFAEILPQAVCSRYGLSFGAKLAPFTHLLLLIFFPITYPASKLLDWALGKEHSVILRRSELKTFVDLHADQAGKGGELSHHETSIITGAMDLTQKTAIDAMTHISETFSLDINSKLDMHTMTQIMSKGHSRVPIHSGNPRNIIGLILVKNLIFCRPEDETPIKNLIIRKIPRVYESWPLYEILNQFKKGHSHMAVVLKGKMETESNEAHAVDSPIFLNIITNKESNQAQINIGESNSSYVLEMSQRSSIPESSDVEFHSPTLENMMVLDNDVGQESKQWDQEIGCMTHEQIMSLNSGVMHDEAIGIITMEDLMEELLQGDILDETDEYVHLQKNIRINLQQSHRSQSRSSRRTFGSSRR* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4290 494 MobiDBLite consensus disorder prediction 475 494 - -
Tpr2g4290 494 Gene3D - 217 357 IPR046342 -
Tpr2g4290 494 SUPERFAMILY CBS-domain pair 220 453 IPR046342 -
Tpr2g4290 494 ProSiteProfiles CNNM transmembrane domain profile. 34 217 IPR002550 -
Tpr2g4290 494 CDD CBS_pair_CorC_HlyC_assoc 231 332 IPR044751 -
Tpr2g4290 494 PANTHER DOMAIN PLANT PROTEIN, PUTATIVE-RELATED 26 369 - -
Tpr2g4290 494 Pfam Cyclin M transmembrane N-terminal domain 43 213 IPR002550 -
Tpr2g4290 494 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 26 369 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4290 Tpr-Chr2 46291403 46300889 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4290 K16302 - gmx:100791387 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4290 2 46291403 46300889 Tpr2g4290 2 46291403 46300889 ECH