Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4146 ATGAGTGAAGGATGGGAGGCGATTTACGTTTATGCTTCAACTCAGTTTTGGATTATATCTAATTTTGATTTTCACTTTCTCCAAGAATGGGATGAAAAGTTAGGCTCTCATAAACCCTTTTTGTCACTGTTAGTCAATTCACTTTTCTTTTATAAACCCTTTTTGTCGCCGTTAGTTCCCATCTCTTTGGAATCTCTTCAACATGTCTCCTCCTCGAGGTCGCGGTGGTTCTGGACTGGTGGAGGGTTCAGAGGACGAGGAGGTGACAGAGGCGGTCGAGGCAATGGTGGAGGTCGAGGCTTTGGTTGTGGAAGAGGAGGAGATTTTAAACCTCGTGGTAAGGTTAGAGGTGTAGGAGGAAGAGGACCCCGTGGAAGACCAATGAATCGTTGTCATGGTAGTGTCAAAGGTGGAATGAAAGGAGGAAGCAAGGTTGTTCTTGAGCCTCATAGACATGAAGGTATTTTCCTTGTTAGGGATAGTAAAGGAGATGCTCTCGTTACTAAGAATCTTGTTCCTGGTGAAGCTGTTTACAATGAGAAGAGAGTTAATGTGCACACTGGAGTTGTGTATGCAGTAGAATTCTCCCACGAAAGTGGACTTGATTTGGTAAATATGGCGAAGAAACTTACTAATGTTATTCCCATTATTGAAGATGCTAGACATCCAGAAAAGTATAAAGAGTTAGTTGGCATTGTAGATGTCATATTTTCTGATGTTGCTCAGCCTGATCAGGCAAGAATTTTAGGGCTAAATGCTTCTTATTATCTTAAAGCTGGAGGGCATTTTGTTATATCCATCAAGGCTGAACGGCTGAACCTGTGTTATCAAATATTTGCCGTTGTGGATATTGAGGCGGGTTTTGGCTCTCTCCCATTGCGAATTTCGGCCGATATTGATAGCAGGATTTAA 912 0.4232 MSEGWEAIYVYASTQFWIISNFDFHFLQEWDEKLGSHKPFLSLLVNSLFFYKPFLSPLVPISLESLQHVSSSRSRWFWTGGGFRGRGGDRGGRGNGGGRGFGCGRGGDFKPRGKVRGVGGRGPRGRPMNRCHGSVKGGMKGGSKVVLEPHRHEGIFLVRDSKGDALVTKNLVPGEAVYNEKRVNVHTGVVYAVEFSHESGLDLVNMAKKLTNVIPIIEDARHPEKYKELVGIVDVIFSDVAQPDQARILGLNASYYLKAGGHFVISIKAERLNLCYQIFAVVDIEAGFGSLPLRISADIDSRI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4146 303 Pfam Fibrillarin 187 273 IPR000692 GO:0003723|GO:0006364|GO:0008168
Tpr2g4146 303 Pfam Fibrillarin 148 186 IPR000692 GO:0003723|GO:0006364|GO:0008168
Tpr2g4146 303 PANTHER FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 79 186 - -
Tpr2g4146 303 PANTHER FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 187 281 - -
Tpr2g4146 303 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 187 281 - -
Tpr2g4146 303 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 79 186 - -
Tpr2g4146 303 Gene3D Vaccinia Virus protein VP39 181 285 IPR029063 -
Tpr2g4146 303 SMART Fibrillarin_2 147 293 IPR000692 GO:0003723|GO:0006364|GO:0008168
Tpr2g4146 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 272 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4146 Tpr-Chr2 44168199 44171683 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4146 K14563 - rcu:8277115 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4146 2 44168199 44171683 Tpr2g4146 2 44168199 44171683 ECH