Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3941 ATGGATTCCAAAACTATAACAATATCAATTTTACTATCTTTGATCCTCTTATGCAATCCCTCAATTGCACAACAACAACAACAACCCGTTACTCCTCCTCTAGCTCCTGCTTTATTCGTCATCGGAGACTCCTCCGTTGATTCCGGTACCAACAATTTTCTTGGTACATTTGCTCGCGCCGATCGTCTTCCTTATGGCAGAGACTTTGATACTCATCAACCAACTGGAAGATTCTCCAATGGAAGAATACCCGTTGATTTTCTTGCGCTGCGTCTCGGACTTCCTTTTGTGCCAAGTTATCTTGGACAGACAGGAAATGTGGAGGATATGATTCATGGTGTCAATTATGCTTCTGCTGGTGCAGGCATTATTGCCCTAAGTGGTTCTGAATTGGGTCAGCATATCTCCTTAACTCAGCAAATTCAACAATTTACCGACACATATCAGCAGTTTATATTAAGTATGGGAGAGGATGCTGCAACCGCTTTCATATCCAATTCTATCTTTTATATCTCTATTGGAATTAATGACTACATTCATTATTATTTGCTCAATGTATCCAATGTCAATAATGTGTACCTTCCATGGCACTTCAACCAGCTTTTAGCATTTTCACTCAGGCGAGAAATAAAGAACTTGTACAACTTAAATGTTAGGAAAATGGTGGTTATGGGACTTGCCCCTATTGGTTGCGCCCCTCGCTACATGTGGGAGTACGGTACTGAGAATGGAGATTGTGTTGAACCGATAAATGATATGTCCGTTGAGTTTAACTTTCTCATGAGATATGTTGTTGAAAAGCTTGCTGAGGAGCTCCCTGATGCCAATATCATCTTCTGTGATGTGTATGAAGGTTCCATGGATATTTTAAACAATCATGATCGTTATGGCTTTAACGTCACGTCCGAGGCCTGCTGTGGATTTGGGAAGTACAAGGGTTGGTTCATGTGCTTATCGCCAGAAATGGCGTGCAGTAATGCTTCCAACTATATCTGGTGGGACCAGTTCCATCCAACTGATACAGTGAATGGAATTCTGGCTGCTAATATATGGAATGGTGAGCATACTAAAATGTGCTATCCTATGCACTTGCAGGACATGGTAATTCAGAAGGCAAAATGA 1122 0.4127 MDSKTITISILLSLILLCNPSIAQQQQQPVTPPLAPALFVIGDSSVDSGTNNFLGTFARADRLPYGRDFDTHQPTGRFSNGRIPVDFLALRLGLPFVPSYLGQTGNVEDMIHGVNYASAGAGIIALSGSELGQHISLTQQIQQFTDTYQQFILSMGEDAATAFISNSIFYISIGINDYIHYYLLNVSNVNNVYLPWHFNQLLAFSLRREIKNLYNLNVRKMVVMGLAPIGCAPRYMWEYGTENGDCVEPINDMSVEFNFLMRYVVEKLAEELPDANIIFCDVYEGSMDILNNHDRYGFNVTSEACCGFGKYKGWFMCLSPEMACSNASNYIWWDQFHPTDTVNGILAANIWNGEHTKMCYPMHLQDMVIQKAK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3941 373 Pfam GDSL-like Lipase/Acylhydrolase 38 348 IPR001087 GO:0016788
Tpr2g3941 373 CDD SGNH_plant_lipase_like 36 353 IPR035669 -
Tpr2g3941 373 SUPERFAMILY SGNH hydrolase 37 352 - -
Tpr2g3941 373 Gene3D SGNH hydrolase 26 355 IPR036514 -
Tpr2g3941 373 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 30 369 - -
Tpr2g3941 373 PANTHER OS02G0290900 PROTEIN 30 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3941 Tpr-Chr2 42025377 42027883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3941 20 368 Acyl Lipid Metabolism Gene Families AT4G10950 68.182 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3941 - - gmx:100788021 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3941 2 42025377 42027883 Tpr2g3941 2 42025377 42027883 ECH