Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3918 ATGGCGCAGAAGAGATTCATCATTGAAGTCGAAAAAGCAAAGGAAGCAACTGAAGATAGACCTTCCAGAGGACCTGCTTATCGTAGCATCTTCGCTAAAGATGGATTTCCTGCTCCTATTCAAGGTCTTGATAGTTGCTGGGATGTTTTCCGATTGTCTGTTGAGAAGTATCCAAATAATCCTATGCTTGGTACCCGAGAGATTGTAGACGGGAAGCATGACAAGTACAAGTGGCAAACTTACAAAGAAGTATATGACATAGTGATCAAAGTCGGAAATTCCATCCGCAGCTGTGGTTATGGAGAACGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAGTGGATTATGAGCATGGAGGCTTGCAATGCTCATGGACTTCTTTGTGTTCCTTTATATGACACCTTAGGTTCTAGGGCCATAGAATTTATTATATCCCATGCAGAGGTCTCAATTGCATTTGCAGAAGAAAAGAAGATACCCGAGCTGTTGAAGACATTTCCAAATGCAGCCAAATATCTCATGACCATTGTGAGCTTCGGAAAGGTTACCCCTGAACAAAAGCAAGAAGTTGGAAAGTTTGGATTGGCAATATATTCATGGACTGAATTTTTACAATTGGGTGAAAGTCAGAGTTTTGATCTACCTACAAAGCAAAGAAGTGATATCTGTACAATAATGTATACTAGTGGAACTACTGGTGACCCCAAGGGAGTATTGATATCCAATGAGAGTATTATTACCCTCTTAGCTGGGGTTAAGCGGCTGTTGGAGAGTGTCAATGAAAAATTGGTCGAGAAAGATGTGTACTTATCATACCTTCCTCTCGCACATTCCTTTGATAGGGTCATTGAGGAGACATTTATATGGCATGGTGCCTCGATAGGCTTCTGGCGTGGGGATGTTAAGCTGCTAATTGAAGACCTCGGGGAGCTAAAACCAACTATTTTCTGTGCTGTACCCCGTGTACTTGATAGAGTGTACTCAGGTTTGACACAAAATATTTCTTCCGGAGGCTTCCTGAAGAAGACTTTATTCAACTTTGCTTATTCATATAAGTTGAATAACATGAAGAAAGGGCATAAGCATGCAGCAGCATCTCCACTTCTTGACAAAGTTGTGTTTGATAAGGTAAAGCAAGGTTTAGGGGGTCATGTACGTGTTATTTTGTCTGGAGCAGCACCTCTGTCTATGCATGTGGAATGTTACTTACGGGTGGTGACTTGTTCTCATGTCCTACAAGGATACGGTCTGACCGAAACCTTTGCGGGAACCTTTGTCTCATTACCTGATGAACTAGACATGCTTGGAACAGTGGGTCCTCCTGTACCCAATGTGGATGCGTGCCTGGAATCTGTTCCGGAAATGGGTTATGATGCCCTTGCAAGCACACCAAGAGGTGAAATTTGTGTAAAGGGTGATACCTTGTTTTCAGGATACTACAAACGTGAAGACCTCACGAAAGAAGTTCTGGTTGATGGATGGTTCCATACAGGGGACATTGGAGAGTGGCAACCTAATGGAAGCATGAAGATTATTGATCGGAAGAAGAATATATTCAAGCTTTCACAAGGAGAATATGTTGCCGTTGAAAACCTGGAAAATATTTTTAGCCAAGTTCCTTCTATTGAATCGATATGGGTTTACGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTACCCCCAGCAAGCAGGCACTTGAACATTGGGCAGAAGAAAATGGTATATCCAAGGACTTCAATTCTCTCTGTGAAGATTCTAGGGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGGAAAGGAAAAGAAGTTGGAAGGATTTGAGTTTATAAAGGCAGTTCATCTTGACCCAGTTCCATTAGATATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCTCAGTTGCTTAAATATTATCAGAATGTGATTGATAACATGTACAAAAGTGGAAATAAACCCCGTGTCTGA 1989 0.4153 MAQKRFIIEVEKAKEATEDRPSRGPAYRSIFAKDGFPAPIQGLDSCWDVFRLSVEKYPNNPMLGTREIVDGKHDKYKWQTYKEVYDIVIKVGNSIRSCGYGERVKCGIYGANSAEWIMSMEACNAHGLLCVPLYDTLGSRAIEFIISHAEVSIAFAEEKKIPELLKTFPNAAKYLMTIVSFGKVTPEQKQEVGKFGLAIYSWTEFLQLGESQSFDLPTKQRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEKLVEKDVYLSYLPLAHSFDRVIEETFIWHGASIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLTQNISSGGFLKKTLFNFAYSYKLNNMKKGHKHAAASPLLDKVVFDKVKQGLGGHVRVILSGAAPLSMHVECYLRVVTCSHVLQGYGLTETFAGTFVSLPDELDMLGTVGPPVPNVDACLESVPEMGYDALASTPRGEICVKGDTLFSGYYKREDLTKEVLVDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIFSQVPSIESIWVYGNSFEAFLVAVVTPSKQALEHWAEENGISKDFNSLCEDSRAKSYILEELSKIGKEKKLEGFEFIKAVHLDPVPLDMERDLITPTYKKKRPQLLKYYQNVIDNMYKSGNKPRV* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3918 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 657 - -
Tpr2g3918 662 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 657 - -
Tpr2g3918 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Tpr2g3918 662 Pfam AMP-binding enzyme 53 524 IPR000873 -
Tpr2g3918 662 SUPERFAMILY Acetyl-CoA synthetase-like 43 655 - -
Tpr2g3918 662 CDD LC-FACS_euk 75 655 IPR045311 GO:0004467|GO:0006631
Tpr2g3918 662 Gene3D - 42 516 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3918 Tpr-Chr2 41878386 41886308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3918 3 658 Acyl Lipid Metabolism Gene Families AT4G23850 74.390 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3918 K01897 - gmx:100814965 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3918 2 41878386 41886308 Tpr2g3918 2 41878386 41886308 ECH