Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3913 ATGGCGTCTTCTCAAGATTCAGTTGCAAAGTCAAATGATCAGAAGTCTATAGTCTCCGCCGGGATCACCGGAGAAGCTCGGAAACCTCCTAGACATCCGTTGATCAGTATCTGCAAGTCTCTTGTTGCCGGTGGAGTCGCCGGAGGAGTTTCACGAACAGCTGTAGCTCCTCTAGAGAGATTGAAGATTCTGCTGCAGGTTCAAAATCGCCACAATGTAAAATACAACGGAACAGTTCAGGGCTTAAAATATATATGGAAAACTGAGGGTTTTAGAGGAATGTTTAAAGGAAACGGAACCAACTGTGCTCGTATTGTCCCAAATTCAGCAGTCAAGTTCTTTAGCTATGAGCAAGCATCTAAGGGTATTCTAAGTCTCTATCGGTTGCAAACTGGAAATGAAGAAGCTCAACTCACTCCTGTTCTGCGTCTTGGAGCTGGGGCATGTGCGGGAATCATTGCAATGTCTGCAACTTACCCTATGGACCTGGTGCGAGGACGCCTAACTGTACAGACAGAAGCATCTCCTCAGCAATATAGAGGAATTTTTAATGCTCTTTCAACAGTCTTCCGAGAAGAAGGAGCTAGAGCATTGTATAAAGGATGGTTACCTTCAGTCATAGGAGTTATACCGTACGTGGGTCTAAATTTTTCTGTGTATGAATCTCTGAAAGACTGGTTGATTCAAACAAAACCACTTGGAATAGGTCAAGACTCGGAGCTAAGTGTGACTACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTATTGGCCAGACAGTGGCATATCCCCTTGATGTCATTCGCAGAAGAATGCAGATGGGTGGATGGAAAGGCGCTGCTTCGATTGTAGCTGCTGATGGGAAGGGTCTTGAGTATACTGGCATGGTTGATGCATTCAGGAAAACAGTAAAGTATGAGGGATTTGGAGCATTATACAAGGGCTTAGTCCCCAATTCAGTCAAGGTGGTACCTTCCATCGCCATTGCCTTTGTGTCATACGAGATGGTCAAGGACGTCCTTGGAGTTGAAATGAGAATATCTGATTGA 1047 0.4527 MASSQDSVAKSNDQKSIVSAGITGEARKPPRHPLISICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNRHNVKYNGTVQGLKYIWKTEGFRGMFKGNGTNCARIVPNSAVKFFSYEQASKGILSLYRLQTGNEEAQLTPVLRLGAGACAGIIAMSATYPMDLVRGRLTVQTEASPQQYRGIFNALSTVFREEGARALYKGWLPSVIGVIPYVGLNFSVYESLKDWLIQTKPLGIGQDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMGGWKGAASIVAADGKGLEYTGMVDAFRKTVKYEGFGALYKGLVPNSVKVVPSIAIAFVSYEMVKDVLGVEMRISD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3913 348 PANTHER SOLUTE CARRIER FAMILY 25 26 343 - -
Tpr2g3913 348 SUPERFAMILY Mitochondrial carrier 34 335 IPR023395 -
Tpr2g3913 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Tpr2g3913 348 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Tpr2g3913 348 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Tpr2g3913 348 PRINTS Mitochondrial carrier protein signature 97 117 IPR002067 GO:0055085
Tpr2g3913 348 PRINTS Mitochondrial carrier protein signature 153 171 IPR002067 GO:0055085
Tpr2g3913 348 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Tpr2g3913 348 PRINTS Mitochondrial carrier protein signature 250 272 IPR002067 GO:0055085
Tpr2g3913 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 339 IPR018108 -
Tpr2g3913 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 226 IPR018108 -
Tpr2g3913 348 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 343 - -
Tpr2g3913 348 Pfam Mitochondrial carrier protein 36 122 IPR018108 -
Tpr2g3913 348 Pfam Mitochondrial carrier protein 138 229 IPR018108 -
Tpr2g3913 348 Pfam Mitochondrial carrier protein 240 340 IPR018108 -
Tpr2g3913 348 Gene3D Mitochondrial carrier domain 33 342 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3913 Tpr-Chr2 41824390 41827440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3913 41 343 EF-hand Containing Proteins AT5G51050 39.474 1.58e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3913 K14684 - gmx:100784834 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3913 2 41824390 41827440 Tpr2g3913 2 41824390 41827440 ECH