Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3911 ATGTCTTCGTCCAAAGATGCAGACCCTAGCTTAGGTTATCTCACTCGCAAAGACACCGAGGTCAAGCTTCCACGTCCAACTAGGGTTAAGAACAAAACTCCCGCACCGATTCAAATTACAGCGGAGCAAATTCTTCGTGAAGCTAGAGAACGTCAAGAAGCTGAGATCCGTCCACCTAAGCAGAAAATCACCGATTCAACTGAGCTCGGCGAGTATCGTCTCCGGAAACGTAAGGAATTTGAAGATTTAATCCGACGAGTTCGATGGAATGTAAGTGTATGGATCAAATATGCACAGTGGGAAGAGTCACAGAAAGATTTCGCACGTGCACGTTCTGTTTGGGAACGAGCTTTGGAAGTTGATTACAAGAATCATACACTATGGTTAAAGTATGCTGAAGTTGAAATGAAAAACAAGTTCATAAATCATGCTAGGAACGTTTGGGATCGCGCTGTTGCTCTTTTACCGCGAGTGGATCAGTTGTGGTATAAGTATATTCATATGGAGGAGATGCTTGGCAATGTGGCTGGAGCAAGGCAGGTTTTCGAGAGGTGGATGCAATGGATGCCGGATCAACAGGGATGGTTATCTTATATAAAATTTGAACTGAGGTATAATGAGATTGAACGAGCTAGAGGGATTTTTGAAAGATTTGTTTTGTGTCATCCTAGGGTTGGTGCTTGGATACGATATGCCAAGTTTGAGATGAAGAATGGCGAGATTCCTAAGGCGAGGGCTGTTTATGAAAGAGCCGTGGATAGGCTTGCAGACGATGAGGAAGCTGAGCTGCTTTTTGTGGCGTTTGCTGAGTTTGAAGAAAGGTGCAAGGAGGCAGAGCGGGCGAGGTGTATATATAAGTTTGCGCTAGATCATATTCCGAAAGGAAGGGCTGAAGATTTGTATCGGAAGTTTGTTGCATTTGAAAAGCAGTATGGTGACAGGGAAGGGATTGAGGATGCTATTGTTGGTAAAAGGAGGTTTCAGTACGAAGATGAAGTGAGGAAAAATCCATTGAATTACGATTCTTGGTTTGATTACATAAGGTTGGAAGAGAGTGTGGGGAATAAGGAAAGAACTAGGGAGGTTTATGAGAGAGCTATTGCTAATGTGCCTCCAGCCGAGGAGAAGCGATACTGGCAGCGTTATATTTATTTGTGGATTAACTATGCACTCTATGAAGAGCTCGACACTGGAGATATGGAACGAACAAGAGACGTGTACAAGGAGTGTCTCAACCAGATTCCTCACCAGAAGTTCTCATTTGCAAAGATATGGCTTCTAGCAGCCCAATTTGAAATACGTCAGCTGAATCTCAACGGTGCTCGTCAAATATTAGGAAATGCTATTGGGAAGGCTCCTAAAGATAAGATATTTAAGAAGTATATTGAGATAGAACTGCAGCTTGGTAACATAGATAGATGCAGAAAATTGTATGAGAAGTATCTGGAGTGGTCACCTGAAAATTGCTATGCATGGAGCAAGTATGCAGAATTGGAGAGATCTTTGGCTGAGACCGAACGAGCTAGAGCAATATTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAGTTGTTGTGGAAGGCATACATTGATTTTGAAACTGCTGAGTGTGAATTCGAGAGAGCAAGAGTGCTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCAGAGTTTGAAGCAACAGCTATTGATAAGGAGAGTTTAGACTTATCAGAAGAAGAACAAAAGGAGCAATGCATTAAGCGTGCCAGAAGGGTGTTTGAGGAAGCTCTAAACCACTTCAGATCATCAGCTCCGGATTTAAAAGAAGAAAGGGCAATGCTCTTGGAGAAATGGCTCAACTTGGAGGCTTCATCTGGTGAGCTAGGTGATGTTAGCTTAGTCCAGTCTAAGCTGCCAAAGAAACTCAAGAAGAGAAGACATGTTTCTACTGAAGATGGTTCTTCTAGAATTGAAGAATTTATCGACTATCTATTCCCTGAGGAAACACAGACAACCAATCTCAAGATCTTGGAAGCTGCTTACAAATGGAAGAAGCAAAAAATGTCTTCCGCTGATGATTAA 2091 0.4256 MSSSKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFARARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVALLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMQWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGAWIRYAKFEMKNGEIPKARAVYERAVDRLADDEEAELLFVAFAEFEERCKEAERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDTGDMERTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLNGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLAETERARAIFELAIAQPALDMPELLWKAYIDFETAECEFERARVLYERLLDRTKHLKVWISYAEFEATAIDKESLDLSEEEQKEQCIKRARRVFEEALNHFRSSAPDLKEERAMLLEKWLNLEASSGELGDVSLVQSKLPKKLKKRRHVSTEDGSSRIEEFIDYLFPEETQTTNLKILEAAYKWKKQKMSSADD* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3911 696 PANTHER - 22 694 - -
Tpr2g3911 696 PANTHER PRE-MRNA SPLICING FACTOR 22 694 IPR045075 GO:0000398
Tpr2g3911 696 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Tpr2g3911 696 SUPERFAMILY TPR-like 526 627 IPR011990 GO:0005515
Tpr2g3911 696 MobiDBLite consensus disorder prediction 1 36 - -
Tpr2g3911 696 SMART hat_new_1 469 501 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 398 434 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 139 171 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 276 310 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 354 388 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 503 537 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 206 237 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 539 570 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 71 103 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 173 204 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 239 274 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 436 467 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 105 137 IPR003107 GO:0006396
Tpr2g3911 696 SMART hat_new_1 320 352 IPR003107 GO:0006396
Tpr2g3911 696 SUPERFAMILY TPR-like 81 207 IPR011990 GO:0005515
Tpr2g3911 696 MobiDBLite consensus disorder prediction 11 27 - -
Tpr2g3911 696 SUPERFAMILY TPR-like 268 535 IPR011990 GO:0005515
Tpr2g3911 696 Gene3D Tetratricopeptide repeat domain 122 326 IPR011990 GO:0005515
Tpr2g3911 696 Gene3D Tetratricopeptide repeat domain 482 667 IPR011990 GO:0005515
Tpr2g3911 696 Gene3D Tetratricopeptide repeat domain 329 481 IPR011990 GO:0005515
Tpr2g3911 696 Coils Coil 495 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3911 Tpr-Chr2 41815532 41820503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3911 K12869 - gmx:100811745 1290.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3911 2 41815532 41820503 Tpr2g3911 2 41815532 41820503 ECH