Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3910 ATGGAAGAAGAATTGATTGATGAGGGAATTCAATTAGAGTCTGCTGACGATTCGCAGCGCCAGAGTAAAGAGGATGATGTGTATTCACCGAATACCGAAAGCCGAAAAATCGTGAAATCTCAACAAGTATTTTTACCTGTTAATCAGGAGTATGATGGTATTCTACATGGTAAAAATGTAGTTGAGGAGGCTGTTAGTGAAGCGGCTACGTCACAACATCCTTATGCAACGGTTGAAGAACTGACGGTGAAAAGTTACAATGGTTCGAGTTTTGATATTGGTACATCGAATAGCCAAGTGCAGATGTATAGTCAACAGAAACATTGGCAGAATCTTTATCAGATAGGAAATAATTCTGGAAATGGAAATTCAGTTAGTGATACTGGGTTGATAAATAGTGGCCAGGCTACATCTAGTGCTTGGGAGAATGTTGGAACTGCATCATTTCCCGAGTTGTTAGCTAGAAAATCACACAGTGATGGTCAGAGCAATGTCATTGAACACTTGGCAGCTGCTGAAAGTAAAGAGGGTGCAGGTGATGTTCATCGAGGAACACGCACAAAAATGATATCCAAATCTGGGTTTGCTGAGTATTTTATTAAAAATACATTGAAGAGTAAGGGTGTTGTACATAAAGGTCCAGCTTTGGATCGCTTCACTGTTCAGTCTAGAGAGCAAAATCAGGCAAAAGCTGGCAGTGATGCAGATCAGAATTGGATTAAGACTGGCAGTGTTGCAGATCGGAATAAGATGAAGGCCAGCATTGGTACAGATCAGAAACAGATGAAGGCTGGCATTGGTTCTCAGTCAAACTCTAACATATCAGTGAAACCTAGTTCCAAATCTGCAAAGTTTCCCTTTAATAGTGATGCTGCTGTGCCTAGATCAAGCAGGACTGAATGTGACGGCGTAACATTGAGAGATTGGTTAAAATCTGGCAAGCGCAAAGCAAGCAAAGTGGAAAGTTTAAATATATTTAGGATGATTGTGGATTTGGTGGATGATTCTCACTCTCGGGGAATTGCATTGCATAGCCTTTCTCCATCTTACATTAAATTGTTACCATCAAATCAGGTCACGTACACTGGGTTACCTACTCAAAAACAGATGGCAGGTAGTGTTGTAAATCCTGAAGTTCTTAACTTAGATAATTCTTTTATTAGAAAAAGGTTGTCTGAGCAAGTAAGGTCGCCCTCTATTGACATAGGGTCCAAGAAACAAAAATTTGATGAGAATGTGAGGACCGGGAGTGACTTGTGTCTTGAGACTGCTAGTAATCATGAAGTTCAAATTCCTACAATTGGATCACAAGATTATAGAAACGAATATGAGGAAGATAACCAATTTTCTATGTATAATTTTGGGAGAATGTCTAGCATCCCTCGTGTATCTAATACAGGTCAATTGTCATCTACTTCTTTATGTCAAAGATTGGAAAATAAGTGGTATGCAAGTCCTGAGGGAGGTTGCACAACATCATCAAATATCTACTGTCTTGGTGTCTTCCTTTTTGAGTTGCTAGGTCATTTTGACTCTGAAAGAGCGCATATTGCAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTTTCAGAAAATCCTAAGGAAGCTGGCTTTTGTCTTTGGCTGCTGCATCCTGAACCATCATCACGTCCAACAACAGGGGAAATCCTACAATCTGAAGTGATCAATGGATTACAGGAGTTGTGTAGTGAAGAATTGTCATCATGTATAGACCAGGAAGATGCAGAATCAGAATTGTTATTGCATTTCCTCTTCTCGTTAAAAGAGCAGAAGCAGAGCGATGCCTCCAAATTGGTTGAACAATTAGAGTGCTTGGAATCAGATATAGAAGAAGCAGAGAGGAGGCATGGCTTAAGAAAACCCTTGGTTTCCTCTGGCTTTCAGAACGGTTACTCTTCTCAGAAAGAGATTATGCCTCTTACAAAGGAACTTTTGAGTGCAGAAATGCTACCCACGGTATCCCCAATCTCTAATACAAATGAACTGAGATTGATGAGAAATATAGGCCATCTCGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCACCTTTCCGAAACAGATGCTACAGATCACCCAGATAAAAATATACTAAGAACTCGTGAGAACTGGTATGTGACCCAAAAAGGCGAGGAGCAACATAAAAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTACAGCAAACTTGAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCCGCAAATGTGATATGCTCTCTGAGCTTTGATCGGGATAAAGATTACTTTGCTTCTGCAGGGATATCTAAGAAAATAAAAATCTTTGACTTCAATACACTTTGCAATGACTCTGTTGATATCCATTATCCTGCTGTTGAGATGTCAAACAGATCAAAGCTCAGCTGTGTTTGCTGGAATAACTATGTTAAGAACTATCTTGCCTCTACAGACTATGACGGTGTAGTGAAGTTATGGGATGCCAGCACAGGTCAAGAATTTTCTCAATATAGTGAACATGAAAAGAGGGCTTGGTCTGTTGACTTCTCTCCGGTATGCCCTACCAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATCAGTGAGAAAAACAGTTTAGGCACAATCAGGAATGTTGCTAATGTCTGCTGTGTCCAATTTTCGGCTCATTCCTCTCATTTGCTGGCCTTTGGATCTGCGAATTACTCAACTTATTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTATTGGTTGGCCATCGTAAAGCTGTAAGCTATGTCAAATTCTTAGACTCTGAAACACTTGTTTCTGCATCTACTGATAATTCATTAAAGATCTGGGATCTCAATAAAACCTCTTCGGTTGGTGCATCTACTAGTGCTCGCAGCCTAACCCTGTCTGGACATACTAATGAAAAGAATTTTGTGGGTTTGTCTGTTGATGATGGATATATTGCGTGTGGTTCAGAATCAAATGAGGTTTACACCTACTATAAATCACTTCCCATGCCAATTACGTCACACAAGTTTGGATCTATTGATCCCATCTCTGGTAAAGAGACTGAAGATGACCATGGTCAATTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAGACATGCTTCTTGCAGCCAATTCAAGTGGATGTATAAAAGTGTTACAGATGGTTTAA 3228 0.4009 MEEELIDEGIQLESADDSQRQSKEDDVYSPNTESRKIVKSQQVFLPVNQEYDGILHGKNVVEEAVSEAATSQHPYATVEELTVKSYNGSSFDIGTSNSQVQMYSQQKHWQNLYQIGNNSGNGNSVSDTGLINSGQATSSAWENVGTASFPELLARKSHSDGQSNVIEHLAAAESKEGAGDVHRGTRTKMISKSGFAEYFIKNTLKSKGVVHKGPALDRFTVQSREQNQAKAGSDADQNWIKTGSVADRNKMKASIGTDQKQMKAGIGSQSNSNISVKPSSKSAKFPFNSDAAVPRSSRTECDGVTLRDWLKSGKRKASKVESLNIFRMIVDLVDDSHSRGIALHSLSPSYIKLLPSNQVTYTGLPTQKQMAGSVVNPEVLNLDNSFIRKRLSEQVRSPSIDIGSKKQKFDENVRTGSDLCLETASNHEVQIPTIGSQDYRNEYEEDNQFSMYNFGRMSSIPRVSNTGQLSSTSLCQRLENKWYASPEGGCTTSSNIYCLGVFLFELLGHFDSERAHIAAMSDLHHRILPPAFLSENPKEAGFCLWLLHPEPSSRPTTGEILQSEVINGLQELCSEELSSCIDQEDAESELLLHFLFSLKEQKQSDASKLVEQLECLESDIEEAERRHGLRKPLVSSGFQNGYSSQKEIMPLTKELLSAEMLPTVSPISNTNELRLMRNIGHLESAYFSMRSKVHLSETDATDHPDKNILRTRENWYVTQKGEEQHKSKDALGTFFDGLCKYARYSKLEVRGILRNADFNNPANVICSLSFDRDKDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNNYVKNYLASTDYDGVVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISEKNSLGTIRNVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLVGHRKAVSYVKFLDSETLVSASTDNSLKIWDLNKTSSVGASTSARSLTLSGHTNEKNFVGLSVDDGYIACGSESNEVYTYYKSLPMPITSHKFGSIDPISGKETEDDHGQFVSSVCWRGKSDMLLAANSSGCIKVLQMV* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3910 1075 ProSiteProfiles Trp-Asp (WD) repeats profile. 807 849 IPR001680 GO:0005515
Tpr2g3910 1075 ProSiteProfiles Trp-Asp (WD) repeats profile. 850 892 IPR001680 GO:0005515
Tpr2g3910 1075 MobiDBLite consensus disorder prediction 13 32 - -
Tpr2g3910 1075 PRINTS G protein beta WD-40 repeat signature 827 841 IPR020472 -
Tpr2g3910 1075 PRINTS G protein beta WD-40 repeat signature 870 884 IPR020472 -
Tpr2g3910 1075 PRINTS G protein beta WD-40 repeat signature 954 968 IPR020472 -
Tpr2g3910 1075 Coils Coil 599 626 - -
Tpr2g3910 1075 ProSiteProfiles Trp-Asp (WD) repeats profile. 936 976 IPR001680 GO:0005515
Tpr2g3910 1075 SUPERFAMILY WD40 repeat-like 759 1072 IPR036322 GO:0005515
Tpr2g3910 1075 Pfam WD domain, G-beta repeat 845 883 IPR001680 GO:0005515
Tpr2g3910 1075 Pfam WD domain, G-beta repeat 935 967 IPR001680 GO:0005515
Tpr2g3910 1075 MobiDBLite consensus disorder prediction 261 281 - -
Tpr2g3910 1075 ProSitePatterns Trp-Asp (WD) repeats signature. 827 841 IPR019775 -
Tpr2g3910 1075 PANTHER PROTEIN SPA1-RELATED 2 1 1075 IPR044630 GO:0009640
Tpr2g3910 1075 SUPERFAMILY Protein kinase-like (PK-like) 301 573 IPR011009 -
Tpr2g3910 1075 Gene3D - 734 1075 IPR015943 GO:0005515
Tpr2g3910 1075 PANTHER PROTEIN SPA1-RELATED 2 1 1075 - -
Tpr2g3910 1075 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 936 969 - -
Tpr2g3910 1075 Coils Coil 1075 1075 - -
Tpr2g3910 1075 MobiDBLite consensus disorder prediction 257 281 - -
Tpr2g3910 1075 ProSitePatterns Trp-Asp (WD) repeats signature. 954 968 IPR019775 -
Tpr2g3910 1075 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 850 885 - -
Tpr2g3910 1075 Gene3D Transferase(Phosphotransferase) domain 1 301 573 - -
Tpr2g3910 1075 SMART WD40_4 929 967 IPR001680 GO:0005515
Tpr2g3910 1075 SMART WD40_4 843 883 IPR001680 GO:0005515
Tpr2g3910 1075 SMART WD40_4 800 840 IPR001680 GO:0005515
Tpr2g3910 1075 SMART WD40_4 886 925 IPR001680 GO:0005515
Tpr2g3910 1075 SMART WD40_4 751 790 IPR001680 GO:0005515
Tpr2g3910 1075 SMART WD40_4 978 1017 IPR001680 GO:0005515
Tpr2g3910 1075 SMART WD40_4 1034 1073 IPR001680 GO:0005515
Tpr2g3910 1075 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3910 Tpr-Chr2 41804002 41812393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3910 827 985 Miscellaneous Gene Families AT5G08390 26.061 2.62e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3910 K16240 - gmx:100778303 1632.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3910 2 41804002 41812393 Tpr2g3910 2 41804002 41812393 ECH