Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3882 ATGGGCATTGCCATAGCATCACTACCTCTCTCAATATCTCAACAAAAACACCATAATATCAAACCCAATTCTAATCATTCTAAGACATACAACACATACTTACTAATCCAATGTTGTCACAACCAAACAGAACACAATCAACACATAGATTCACTGACCAACAACAATGTACATACTAGGTTTCCAGAGAAAAATCCTCTCATAAATCCTTTAGTAGCTTCCACTTTTGGTGTAGTACCTCCAAGGCCTAAAAGAATAATCCTTGTTAGACATGGAGAGAGTGAAGGAAACGTGGATGAAAGTGTTTACACAAGGGTACCTGATCCAAAAATTGGCCTTACTAAAAGAGGAAAAGTTCAAGCAGAGGAATGTGGACAAAGAATCAAGAACATGATTGAGAAAGATAGTGATGAAAATTGGCAACTCTACTTTTATGTGTCTCCATATAGAAGGACTCTGGAAACTTTGCAAAGTTTAGCTCGGCCTTTTGAACGCTCGAGAATTGCTGGTTTTAGAGAAGAGCCTCGCATTCGAGAACAAGATTTCGGGAATTTTCAAAATAGAGAATTGATGAAAGTTGAAAAAGCGCAACGCAATCTTTACGGTCGTTTCTTTTACCGATTTCCAAATGGGGAATCTGCTGCTGATGTGTATGATAGAATCACCGGATTTAGAGAAACACTTAGAGCGGATATTAATATAGGACGGTATCAACCACCCGGAGAGAAGAATTTTGACGTGAACTTAGTCATCGTGTCACACGGTTTAACGCTTAGAGTTTTTCTCATGAGGTGGTACAAGTGGACAGTTGAACAGTTTGAGGGTCTTAACAACTTTAACAATGGAGGCGAGCTTGTCATGGAAAGGGGTTATGGTGGAAGGTATAGCTTATTGATGCACCATGATGAACAAGAGTTAAGACAATTTGGATTGACTGATGAAATGCTGATTGATCAAGAATGGCATAAAATTTCTAGACCTGCTGATCTGAATTACGATTGTCCAATGGTGAATTCCTTCTTTCCTCATCTTCATGAAGAAACAAGCAGAATCCAACAACAAGGATAG 1068 0.3876 MGIAIASLPLSISQQKHHNIKPNSNHSKTYNTYLLIQCCHNQTEHNQHIDSLTNNNVHTRFPEKNPLINPLVASTFGVVPPRPKRIILVRHGESEGNVDESVYTRVPDPKIGLTKRGKVQAEECGQRIKNMIEKDSDENWQLYFYVSPYRRTLETLQSLARPFERSRIAGFREEPRIREQDFGNFQNRELMKVEKAQRNLYGRFFYRFPNGESAADVYDRITGFRETLRADINIGRYQPPGEKNFDVNLVIVSHGLTLRVFLMRWYKWTVEQFEGLNNFNNGGELVMERGYGGRYSLLMHHDEQELRQFGLTDEMLIDQEWHKISRPADLNYDCPMVNSFFPHLHEETSRIQQQG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3882 355 PANTHER OS06G0109000 PROTEIN 22 345 - -
Tpr2g3882 355 Pfam Histidine phosphatase superfamily (branch 1) 86 283 IPR013078 -
Tpr2g3882 355 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 22 345 - -
Tpr2g3882 355 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 88 97 IPR001345 GO:0003824
Tpr2g3882 355 SUPERFAMILY Phosphoglycerate mutase-like 83 300 IPR029033 -
Tpr2g3882 355 Gene3D - 81 320 IPR029033 -
Tpr2g3882 355 CDD HP_PGM_like 85 288 IPR013078 -
Tpr2g3882 355 SMART PGAM_5 85 261 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3882 Tpr-Chr2 41584408 41586482 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3882 - - mtr:MTR_5g010090 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3882 2 41584408 41586482 Tpr2g3882 2 41584408 41586482 ECH