Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3879 ATGGGACAAGAGTTGAATCTCAATGAAAAGTCTTGTGAGAGTCTCAGTCCCAATTCTGTTCTTCCATCTCATCAAAACTGTTTGAATATGAAGGAGAAAGCATATAGAAATGAGAAATTCAAAGAGTACTTTTCTGAGATCAATTCTTCATGCAAGAGCCTTCCATGTAGATCTCATAAACTAGAAGCGAATACCGAAAACAGACGCGGTTCCGTTTATCAGAGTTCAAATCAGGTAATCAATATAAACAAAATGGCCACCATATTAGAAGAAAGAAAAAAAATAGAAATTTCAAGTAGGACTAGTAGTGATGCCTCTTTTTCTAGTAGTAGCATTTTTCATTCTTTATGTGGTTCAGATGATGAAGATTCTATGATATCTCATCATTCCGAAATGAGTCCTCAATCTCCATCTGTTTCTGGTTCTTGTGCTTGTATGGATCATACCATATCAAATGGTTTTATTGAATTGTGCATAAATTCAGACTTTTGTGATAAAAAATGTAGTGTAGTAGAAGGATTAGGTTCTGTAAATTCAAAGATTAGAAGTAATACGATTACTAAATCTCTTTTAAGTGGTAATAATTCTCCTCTTCAAAAAGTGGAAATCTCTGACTCTCACCAACCATATCCATCAGAAAGTGATTCTACATCAAGAGTGAGTTCAAAAGTCCCATTCAGTCCTATCAGAAAAAGGCTAAGCCCTTTCACAAAGTCAAAAAAAGTTGCAAGAAACATGGCTTGTCAAAAATCATTGTTGAATGACTTTTCCAACACAACAAAAGATGCTGCTGACATGGTTTCTGAACTTGTCAATAGAGATATCAAGAATGCTAGTTTAGCATGTTCACCTGTTCATTTGCATGGTAATCTCAAGTTGAAAACCAAACAAGGAGTTCCTTATTTTGAGTTTAAGGTAAATTCTCCTGAAGATGTCTTTGTCGCCAAGACATGGAGAGTAGGTAATGCTTTCAATTGGGTATACACCTTTCACTCTCTTGATAATAGAAAGAAGAACAATGCAGGTAGTTTGGGATCTCAACATTGCGAGAAAGACTCGTCAATGATAGCACAAATGCTAGTTTCCTATAGTTTATGTACTGAATCAGAAGATGGAGTATTTGGAAACTATATGGTAACAGAATTTGTGGTGTATGATTTTACACACTCAAGAAAAAGTGATTCTAAAACTCTGAATGCTTCTAGTCTTGAAAGTGCTGCTATTGTTTTGCGAATTCCGTTTCATAAGAGAGAAAGCTTGAAAAACAAAAGCGGCGATAGAATAAATAATAAAGCATATTCCAAACCAAGTGATATATCTTCACCAATAGAGCAAGTGAAGGTGGTATTACCGATTGGCAACCATGGTTTGCCAAGTGGTGAAAGCGAGGGTCCTTCATCGTTACTTGATCGATGGAAACATGGTGGAGGTTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAACCCCGGTGTTCAATTTCATGGAGATAGCCCTCTTGCGGAAAACTATCAACCACTCGAACTTTTTTCTCAGCCTCAGGGAATCAAAGAAAGTATTCCTACATTTAGCATGACATTAGTTGAAGAGGGGCAATATGCAATTGATTTCCATGCAAAATTATCTCCATTACAAGCTTTCTCCATTTGTGTCGCCATTTTGCATGGCACCTCCGCCTTCAGTTCTACGGCAGAAAAGGAGAAAAACCGACAGTTATCTCAATGCAATTCACTAAATACACTTATTGAAGAGGAAGTAGAACTTTTTATCAAATCGGTCGCAACAGAAGAGAACAAGACAATGTCTAATATTCAACAGAGAATTCATCGATCATGTGGGCTGAAACCGCCTTTTTCTCCTATTGGGCGAGTATAA 1890 0.3714 MGQELNLNEKSCESLSPNSVLPSHQNCLNMKEKAYRNEKFKEYFSEINSSCKSLPCRSHKLEANTENRRGSVYQSSNQVININKMATILEERKKIEISSRTSSDASFSSSSIFHSLCGSDDEDSMISHHSEMSPQSPSVSGSCACMDHTISNGFIELCINSDFCDKKCSVVEGLGSVNSKIRSNTITKSLLSGNNSPLQKVEISDSHQPYPSESDSTSRVSSKVPFSPIRKRLSPFTKSKKVARNMACQKSLLNDFSNTTKDAADMVSELVNRDIKNASLACSPVHLHGNLKLKTKQGVPYFEFKVNSPEDVFVAKTWRVGNAFNWVYTFHSLDNRKKNNAGSLGSQHCEKDSSMIAQMLVSYSLCTESEDGVFGNYMVTEFVVYDFTHSRKSDSKTLNASSLESAAIVLRIPFHKRESLKNKSGDRINNKAYSKPSDISSPIEQVKVVLPIGNHGLPSGESEGPSSLLDRWKHGGGCDCGGWDMACPLILLGNPGVQFHGDSPLAENYQPLELFSQPQGIKESIPTFSMTLVEEGQYAIDFHAKLSPLQAFSICVAILHGTSAFSSTAEKEKNRQLSQCNSLNTLIEEEVELFIKSVATEENKTMSNIQQRIHRSCGLKPPFSPIGRV* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3879 629 Pfam Domain of unknown function (DUF3527) 401 561 IPR021916 -
Tpr2g3879 629 Pfam Domain of unknown function (DUF3527) 284 395 IPR021916 -
Tpr2g3879 629 PANTHER EXPRESSED PROTEIN 401 629 - -
Tpr2g3879 629 PANTHER EXPRESSED PROTEIN 4 396 - -
Tpr2g3879 629 MobiDBLite consensus disorder prediction 202 224 - -
Tpr2g3879 629 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 401 629 - -
Tpr2g3879 629 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 4 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3879 Tpr-Chr2 41542355 41545568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3879 - - mtr:MTR_5g010160 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3879 2 41542355 41545568 Tpr2g3879 2 41542355 41545568 ECH
Tpr2g3879 2 41542355 41545568 Tpr3g0647 3 6318059 6322620 PCT