Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3874 ATGAGGTACGTGAAACCCTTTGAGTTGTTTCATGATTTGATGAAAACAACACAGAAAGAACGTGGGAGATTGATGGGTTTAGATGTTGGCGATAAATATGTTGGTCTAGCTCTTTCTGATTTCGATAACAAAATTGCTTCACCTTTCAGTGTTCTCCTCCGGAAGAAGAATAATGTTGATTTAATGGCTGATGATTTTAAGAGTCTGATCTCTAGATATTCCTTGAAGGGATTTGTTATTGGCATTCCTTATAGTTGGCATGAGGTGTCGTCTGATGCTTGTCAAGTGAATGTCTTCATTAATAACCTCCATAGAACAAACATGCTTGAAGGTTTAAACTATACATTCTGGAATGAGAGCTTCTCGTCAAAGAGTGTAGACTTAATAATAAAGTCTTTGAACTTTAAACATCCAGTTCATTCCAAAACTATGCTAGACAAGTTTGCTGCTGTAGGAATACTTCAGGGGTACCTGGACTACGCTAACAAAAAAACAAAGCTGATAACACCGGACCAGAGTATGACTACTTAA 531 0.3729 MRYVKPFELFHDLMKTTQKERGRLMGLDVGDKYVGLALSDFDNKIASPFSVLLRKKNNVDLMADDFKSLISRYSLKGFVIGIPYSWHEVSSDACQVNVFINNLHRTNMLEGLNYTFWNESFSSKSVDLIIKSLNFKHPVHSKTMLDKFAAVGILQGYLDYANKKTKLITPDQSMTT* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3874 176 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 166 IPR005227 GO:0006364
Tpr2g3874 176 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
Tpr2g3874 176 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Tpr2g3874 176 CDD YqgF 24 159 IPR005227 GO:0006364
Tpr2g3874 176 Gene3D - 22 169 IPR037027 GO:0006139
Tpr2g3874 176 SUPERFAMILY Ribonuclease H-like 22 161 IPR012337 -
Tpr2g3874 176 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 166 - -
Tpr2g3874 176 SMART rnase_8s 22 126 IPR006641 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3874 - - gmx:100305864 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3874 2 41495880 41499038 Tpr2g3874 2 41495880 41499038 ECH