Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3865 ATGTTTCGTTCTGCAAAATGGAAAAGTGAGAAGAACAGAATTAAAGCTGTTTTTAAGCTTCACTTCAATGCCACTCAGGTGTTACAATCTGGGGTGGATGCATTGGTGTTGTCAATAGTTCCTGGTGACATTGGAAGACCAACTAAGAGATTAGAGAAAGCTACGGTTCGAGATGGAAATTGTCGGTGGGAAAATCCGGTATACGAAACAATAAAGTATTTTCAAGATCCCAAGACTGGGAAAATCGGCGACAAAATATATAATTTTTTGCTTTCAACGGGGTTATCGAAAGCTAGCGCCGTCGGGGAGGTTTCTATTAATTTTGCTGATTATGTAGATTCCACAAAGCCCTCTTCCGTCTCTCTTCCCGTCAGAAATTCTCATTGCGATGCTGTTTTACATGTATCTATCCAAAGGCTGCAAGATAACGGTGATCAAATTCAAAGAGAGGAAGATGAATGTGAAGATCCAAAACTAAAAATTGATGATAGGAGCTTAAGGAACAAGTTAAACAATGGCGATACAGATGAAAACACTAAAAGTTATTTTTCTGAAGATGTTTCTAACAAACCAATCATCAATAGGACGTCTAGTGTGTCTGACACTACATTGTCAAGCTCCGATGACAGTTCTGGAGTCGATACTCCCTGCAAAATTGGATTGAGAAAAACAAACATCGACCGCACCACGAACCAGTTTGTTCCGGTTATGCACCGTGCTGCAGAACCTCCAAACACTGATGTCAATACCTCAACACCAATGCATGATTTACATGAGAGATCACAATGGGGTTGGTCATCTAGCTCAGAGCTTGGGTTAAGTACGGGCGATTCAACAAATGGCTCTCATAATTCCCTTTCAAAGGAAACGTCACAAGAGGCATCTCATTCGGAGATTGAGAGACTCAAAGCTGAACATGCTGCTTTGGCGAGGCATGTAGATGTGTCGGACATGGAACTACAGACCCTAAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGGCAGGATCTCTCGAAGGAAATCATTATCTTGAAAGATGAAAGGGATGCACTAAAGACAGAATGCGATAATATCAGGTCTTTCCATAAACGCATGGATGATGCCAAAGCGAGGAACAGGTCACAGTTGGAAAATGGAGATCATCATGCTTTTGTTGAAGAAATAAGACAAGAATTGAGCTATGAGAAAGACACGAATGCAAATCTCCGACTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTGGTCCTTGCGGTGCAGGACTTGGAAGAAATGTTGGAGCAGAAAAATAGCGATATGCGTAAGTGTAATAATTCCAATAAACACGAACATGATAAAAATTCCCGAGAGTTAGAGATGAAACTCTCAAAATGTGAAACAGATGATGATGAAGATCAGAAAGCATTGGACGAGCTTGTCAAGGAGAAGAGTGGCGCCAAGGAGACGGACTTGCTTGAGAAAAAAATAATAGACCTCTATGGTGAAATTGAAATGTATAGGAGAGACAAAGAGGAGTTAGAGATGCAGATAGAACAGATTGCACTCGACTATGAGATATTGAAACAAGAAAACCACAGCATTGCGAATAAGTTAGAGCAAAGCCAATTGCAGGAACAGTTAAACATGCAATGTGAATGTTCAAATCCTCCGGCTGCTATGAATGATATTGAAACTCACATTGAAAATCTGGAAAATGAACTCAAGGAACAGTCGGAAGATTTCTCAAATTCTCTAGCTACCATTAAGGTACTGGAAACTCATATCAGAAGATTAGAGGAAGAAACGGAGAAACAAGCACAAGGATTTGAAGCTGATATAGAAGCGGTGGCACGTGAAAAAGTTGAGCAAGAGCAAAGAGCTATCCAAGCCGAGGAAACTCTACGAAAAACTAGACAAAAGAATGCTAATACCGCTGAGAGGCTTCAAGAGGAATTCCAAAGACTCTCGATGCAAATGACTTCAACATTTGATGAAAATGAGAAGGCTACCATGAAAGCATTGACAGAAGCAAGTGAACTACGTTTACAGAAAAATCTAGTGGAAGGAATGCTGCATAAAGTCCAAGAAGAACTTCAGTTAACTAAAGCCGATTATGAGGTAAAACTGAACGAACTTTCAAATCAAATAGATACAATGACAGTTCAGATACAGCAGATGGTGGCGGAAATCGAAGACAAGTCTAAGCAGCTTGAAAATCAGAAGAAGTTTGGAGAACAAGTTAATACTGATTTCTCTGAGGAGATTGAGATACTAAAATCTGAGAATGAAAAGCTTATGGTGGAGATTTCACGCTTAAATGAACAAGTAGAAGGAAAAGAAATCTTACAAGCTGACTTGGAACTAATGAGAAAATCAATTGAGGAATATGAAACACTGTTACATCAAGGAACTGTGGAAAGAAATGAACTTGCGAGTACAATTGCATCATTGAAGAAGGAAGCGGAGCATACACTTAACGAGATAAATAAGATGAGAAATCAGAAGGATGAAAAAGAAGCAGAAGCGAGACTCTTGAAGTCGGAGTTGGAAGCGGTTAGAGCTCAATGCAGTGATTTGAAACAGTCACTTTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAGCAAATTTCTCAGCTAAAGAGCGAAATAAAGAAGAAGGGCGATGCATTAACTAGCATCGAGAAGAGGTTCAGGGATACTAGCGGCCGCAACCAACTTTCTGATGGTACTAAAACCAGTCCAATCAACAAAAAAACTGCTTCCAGTCCTCAGAATTCAAAAGAAATGGCAAGTATGAGAGAGAAAATAAAAATGCTTGAGGGTCTGGTAAAGTCAAAGGAAACTGCCTTGGAAACTTCTACAACTTCATCTATGAAGAAGGAAAAGGAGCTCCAGAGCAGAATTATGGAGCTGGAGAACAAGGTAGAGGAAGTCAATCGGAATTTTACTTTACACGAGGATAGAAGTGTAACAGATTCAAACGAGATATCAGAAGAATTGAGGAATAGGTTGGAACAAGCCGACAACAATCTTAGTGACGTATTGATTGAATTGTCGTCGTTGAAGGAAAGAAACAAATCAATGGAAAGCGAACTCAAAGAAATGCAAGAGAGATACTCAGAAATGAGTCTCAAATTCGCCGAGGTAGAAGGTGAAAGACAAATACTTGTTATGACTGTAAGAAACCTCAAGAGTTTCCACAAAGGATGA 3195 0.3962 MFRSAKWKSEKNRIKAVFKLHFNATQVLQSGVDALVLSIVPGDIGRPTKRLEKATVRDGNCRWENPVYETIKYFQDPKTGKIGDKIYNFLLSTGLSKASAVGEVSINFADYVDSTKPSSVSLPVRNSHCDAVLHVSIQRLQDNGDQIQREEDECEDPKLKIDDRSLRNKLNNGDTDENTKSYFSEDVSNKPIINRTSSVSDTTLSSSDDSSGVDTPCKIGLRKTNIDRTTNQFVPVMHRAAEPPNTDVNTSTPMHDLHERSQWGWSSSSELGLSTGDSTNGSHNSLSKETSQEASHSEIERLKAEHAALARHVDVSDMELQTLRKQIVKESKRGQDLSKEIIILKDERDALKTECDNIRSFHKRMDDAKARNRSQLENGDHHAFVEEIRQELSYEKDTNANLRLQLKKMQESNAELVLAVQDLEEMLEQKNSDMRKCNNSNKHEHDKNSRELEMKLSKCETDDDEDQKALDELVKEKSGAKETDLLEKKIIDLYGEIEMYRRDKEELEMQIEQIALDYEILKQENHSIANKLEQSQLQEQLNMQCECSNPPAAMNDIETHIENLENELKEQSEDFSNSLATIKVLETHIRRLEEETEKQAQGFEADIEAVAREKVEQEQRAIQAEETLRKTRQKNANTAERLQEEFQRLSMQMTSTFDENEKATMKALTEASELRLQKNLVEGMLHKVQEELQLTKADYEVKLNELSNQIDTMTVQIQQMVAEIEDKSKQLENQKKFGEQVNTDFSEEIEILKSENEKLMVEISRLNEQVEGKEILQADLELMRKSIEEYETLLHQGTVERNELASTIASLKKEAEHTLNEINKMRNQKDEKEAEARLLKSELEAVRAQCSDLKQSLFEDEAEKEKLRKQISQLKSEIKKKGDALTSIEKRFRDTSGRNQLSDGTKTSPINKKTASSPQNSKEMASMREKIKMLEGLVKSKETALETSTTSSMKKEKELQSRIMELENKVEEVNRNFTLHEDRSVTDSNEISEELRNRLEQADNNLSDVLIELSSLKERNKSMESELKEMQERYSEMSLKFAEVEGERQILVMTVRNLKSFHKG* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 889 925 - -
Tpr2g3865 1064 Coils Coil 689 793 - -
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 260 292 - -
Tpr2g3865 1064 Coils Coil 490 538 - -
Tpr2g3865 1064 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1064 - -
Tpr2g3865 1064 Coils Coil 801 891 - -
Tpr2g3865 1064 Coils Coil 399 440 - -
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 260 299 - -
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 898 924 - -
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 165 183 - -
Tpr2g3865 1064 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 145 IPR019448 -
Tpr2g3865 1064 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Tpr2g3865 1064 Coils Coil 554 581 - -
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 431 452 - -
Tpr2g3865 1064 Coils Coil 985 1047 - -
Tpr2g3865 1064 Coils Coil 593 659 - -
Tpr2g3865 1064 MobiDBLite consensus disorder prediction 165 186 - -
Tpr2g3865 1064 Coils Coil 956 983 - -
Tpr2g3865 1064 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1064 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3865 Tpr-Chr2 41432894 41438077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3865 - - gmx:100792602 1423.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3865 2 41432894 41438077 Tpr2g3865 2 41432894 41438077 ECH
Tpr2g3865 2 41432894 41438077 Tpr3g0665 3 6449948 6455125 PCT