Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3839 ATGGGTGTTTGGTTTTGGAGGCTAATTCTTCTTTCTCTTGCTGGAATTATCTTCTCTCCTAAACATTGTGTATCTCAAAAAGAAACAGGTAGAAAATACAAGTTTATGCAAGATGCAACTTCAGCACCAAGAACATCCTACTATGACTACATCATAATTGGTGGCGGCACCGCAGGGTGTCCATTGGCGGCGACACTGTCACAAAATCACAATGTTTTGATGCTTGAGCGTGGTGGATCACCTTATGGGAACCCAAACATAACAAATTTAAGTGCATTTGGTGATCCATTATCTGATACCTCTCTTTCCTCTCCTGCTCAACGATTTATTTCTGAAGATGGTGTCATCAATTCAAGAGCTCGTGTTCTTGGTGGTGGAAGCTGCATTAATGCTGGATTCTATACTCGTGCAAGCCGTCGCTACGTAAGAGAAACTGGTTGGGAAGAAAAATTGGTGAATGAATCATATAAATGGGTGGAGAGGGTGGTGGTGTTCCGGCCTCCTGTGCTGCAATTTCAATCAGCAGTTAGGGATGGATTGTTGGAAGCAGGGGTATTGCCTTACAATGGCTATACTTTTGATCATATTTATGGGACTAAGGTTGGAGGTACAATCTTTGACCAAAATGGTCATAGACATACTGCAGCTGATCTTTTGGAATATGCTAACTCCGATGGAATTACTCTTCTTTTGCATGCCACTGTTTATAGGATCTTGTTTACTAAAGAGAGATCAAATTCAAGGCCAGTTGCATATGGAGTTGTATTCAAGGATGCTCATGGGTTAGAACATAGGGCATATCTGAAACAGGGGACTAAGAGTGAGATCATAGTTTCAGCTGGTGCACTAGGTAGCCCACAACTTCTAATGTTGAGTGGAATTGGACCAACCCATCATCTTAGGGAACACAATATTGATGTAGTATTGGATCAACCTTTGGTAGGACGGGGAATGAAAGATAATCCGATGAACGCTGTTTTTATCCCGTCTCCTACCCCCACAGAAGTATCCCTCATCCAAGTCGTTGGTATTACCAACTTCGGCAGCTACATTGAAGCCGCAAGTGGTGAAAACTTCAACCGTGATTCTCAACAAAACTTTGGAATGTTTTCTCCAAAGATTGGTCAGTTTTCAAAGTTGCCACCAAAGCAAAGGACCCCAGAAGCCCTAGCAAAAGCAATAGAAAAGATGGAGAGCCTACAAGAAGAAGCTTTCCAGGGTGGATTCATTCTAGAAAAAATAAATGGTCCAATTTCAAAGGGTCATTTGGAACTTAGAAACACTGATCCAAATGAAAACCCTTTGGTAACATTTAACTATTTCCAAGACCCAAGAGACTTAGAAAAATGCATACAAGGCATTAGAATCATTGAAAAAATAATCGATTCAAAGGCTTTTTCTCCATTTAAATACAATAACATGTCAGCTTCTAGTCTAATTAACATGACTGCAAATAGGACTTCAATTTCTTTGGCACAATTTTGTAGAGACACTGTGATGACTATATGGCATTATCATGGTGGTTGCCAAGTTGGTAGGGTTGTCGATCGCAATTATAAGGTTCTTGGCGTCGATGCATTGCGCGTAATCGATGGTTCTACTTTTAATTATTCTCCTGGAACTAATCCTCAAGCTACTGTTATGATGCTTGGAAGGTATATGGGAGTTAAAATATTGCAGGAGAGGCTTGTTGCTGATGAAACTAAATAA 1710 0.4053 MGVWFWRLILLSLAGIIFSPKHCVSQKETGRKYKFMQDATSAPRTSYYDYIIIGGGTAGCPLAATLSQNHNVLMLERGGSPYGNPNITNLSAFGDPLSDTSLSSPAQRFISEDGVINSRARVLGGGSCINAGFYTRASRRYVRETGWEEKLVNESYKWVERVVVFRPPVLQFQSAVRDGLLEAGVLPYNGYTFDHIYGTKVGGTIFDQNGHRHTAADLLEYANSDGITLLLHATVYRILFTKERSNSRPVAYGVVFKDAHGLEHRAYLKQGTKSEIIVSAGALGSPQLLMLSGIGPTHHLREHNIDVVLDQPLVGRGMKDNPMNAVFIPSPTPTEVSLIQVVGITNFGSYIEAASGENFNRDSQQNFGMFSPKIGQFSKLPPKQRTPEALAKAIEKMESLQEEAFQGGFILEKINGPISKGHLELRNTDPNENPLVTFNYFQDPRDLEKCIQGIRIIEKIIDSKAFSPFKYNNMSASSLINMTANRTSISLAQFCRDTVMTIWHYHGGCQVGRVVDRNYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILQERLVADETK* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3839 569 ProSitePatterns GMC oxidoreductases signature 2. 281 295 IPR000172 GO:0016614|GO:0050660
Tpr2g3839 569 Pfam GMC oxidoreductase 48 322 IPR000172 GO:0016614|GO:0050660
Tpr2g3839 569 SUPERFAMILY FAD-linked reductases, C-terminal domain 318 508 - -
Tpr2g3839 569 SUPERFAMILY FAD/NAD(P)-binding domain 44 561 IPR036188 -
Tpr2g3839 569 Pfam GMC oxidoreductase 417 552 IPR007867 GO:0016614
Tpr2g3839 569 PANTHER OSJNBA0019K04.7 PROTEIN 18 563 - -
Tpr2g3839 569 Gene3D - 165 501 - -
Tpr2g3839 569 PIRSF Alcohol_oxidase 26 568 IPR012132 GO:0050660
Tpr2g3839 569 Gene3D - 48 551 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3839 Tpr-Chr2 41158284 41161995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3839 3 567 Miscellaneous Gene Families AT5G51950 56.552 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3839 - - gmx:100777238 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3839 2 41158284 41161995 Tpr2g3839 2 41158284 41161995 ECH