Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3820 ATGAAAGTGATAGTGCCTTTGCAAGGAGTAGTTCAACAAGGAACATGGGGTCTTTTTTTAGGTTCAGTTATTCCATGTGCTCTTTTATACTTTCTTCAATTCTATTTTAAGACACGTCATCGTAACGCCAACACTCCTCCTCCAACAGCTACCAACAACAACCTTCCGCATCCGGAACTCGCTGCCTTGTCACGCACTCTCTCGCAGCGAATCAGAGGCTCAACTGCCTCCGCTTATGTCTCCGGTCGGGTTAATTCAATCATCGTAGATTCTCCTTATTATGTAGGTTTAAACATGGTTGCAGATAATCCTTACCATCGGATTCATAATCCTGATGGTGTTATTCAGCTTGGTTTGGCACAAAACACTCTATGTGTGGACTTGATTCAAGAATGGATTCGTCACACCGGAAGCGCTGCTATACTGGAGACACAATCAAATTGCGGTTGCCTCAGTATCACTGACCTTGCTACTTACCATGGATTCATGGACTTCGAAGTGGTTGTGGCTGGTTTCATGTCTCAAGTTTTGGAAAAACCAGTTTTCTTCAACCCCTCACATATGGTGCTAACTGCAGGTGCCATCTCTGCCATTGAAATTCTAAGCTTCTGCCTTGCAGATAATGGAAATGTGTTCCTTGTTCCGACACCTCATAGTCCTGGCTTTGATGAGGCCGTAAAATGGAGAACTGGGGTGGATATAGTATATGTTCCATGTCGCAGCGCTGATGACTTCAACCTAAGCATAACTGCACTTGACCAAGCCTTCAACCAAGCGAAGAAACGTAGTCAAAAAGTTCGTGGAGTAATAATATCAAACCCTTCAAACCCTGCTGGCAAATTGTTAAATCGAGAAACACTACTTGATCTTCTGGACTTTGCTAGAGAGAAGAACATTCACATAATCTCTAATGAAATATTTGCTGGCTCTGCTTATAGAAACGAAGAGTTTGTGAGCATGGCAGAAATCATGGAAGCAGAAGATCATGATCGGGACAGAGTTCACATAGTGTTTGATTTAGCAAATGAGCTATATGTTCCGAGTTTTAATGTGGGAGTTATCTACTCCTATAATGAGAATGTTGTGTCTGCTTCCAAAAAATTGGCGAAATTCTCACCTGTTTCTGCTCCAACTCAGCAATTGCTTATCACCATGATTTCAGATACAGGGTTTATTCAAGAACTCATAAAGACTAACAAATTGAGGCTGCACAAAATGCATAATGCATTTGTGGCAGGATTAGAGCAGTTGGGTATTGAGTGCACCAGAAGCAAGGGTGGTTTTTGCTGCTGGGCTGACATGAGTAAATTCATCCGATCTTACAACGAAAAGGGGGAACTTGAGCTCTGGGATAGATTACTGAATCTAGCTAAGATCAATGTTACCCCGGGTTCCTCTTGTCACTCTATTGAACCTGGATGGTTCCGTTTTTGTTTCACTACATTGACTGAAAAGGATATTCCTGTAGTAATGGAACGGCTTGGGAGAATTTCTGAGACTACAAGTTGA 1509 0.4228 MKVIVPLQGVVQQGTWGLFLGSVIPCALLYFLQFYFKTRHRNANTPPPTATNNNLPHPELAALSRTLSQRIRGSTASAYVSGRVNSIIVDSPYYVGLNMVADNPYHRIHNPDGVIQLGLAQNTLCVDLIQEWIRHTGSAAILETQSNCGCLSITDLATYHGFMDFEVVVAGFMSQVLEKPVFFNPSHMVLTAGAISAIEILSFCLADNGNVFLVPTPHSPGFDEAVKWRTGVDIVYVPCRSADDFNLSITALDQAFNQAKKRSQKVRGVIISNPSNPAGKLLNRETLLDLLDFAREKNIHIISNEIFAGSAYRNEEFVSMAEIMEAEDHDRDRVHIVFDLANELYVPSFNVGVIYSYNENVVSASKKLAKFSPVSAPTQQLLITMISDTGFIQELIKTNKLRLHKMHNAFVAGLEQLGIECTRSKGGFCCWADMSKFIRSYNEKGELELWDRLLNLAKINVTPGSSCHSIEPGWFRFCFTTLTEKDIPVVMERLGRISETTS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3820 502 Pfam Aminotransferase class I and II 116 494 IPR004839 GO:0009058|GO:0030170
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 117 143 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 150 166 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 187 207 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 209 230 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 263 287 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 299 322 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 333 357 - -
Tpr2g3820 502 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 365 388 - -
Tpr2g3820 502 SUPERFAMILY PLP-dependent transferases 83 497 IPR015424 -
Tpr2g3820 502 Gene3D Aspartate Aminotransferase, domain 1 103 493 IPR015422 GO:0003824
Tpr2g3820 502 Gene3D - 137 388 IPR015421 GO:0003824
Tpr2g3820 502 CDD AAT_like 181 496 - -
Tpr2g3820 502 PANTHER AMINOTRANSFERASE ACS12-RELATED 2 500 - -
Tpr2g3820 502 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3820 Tpr-Chr2 41034436 41038132 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3820 K14270 - gmx:100783490 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3820 2 41034436 41038132 Tpr2g3820 2 41034436 41038132 ECH