Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3816 ATGTATTCAATTTCATGCAGAGTGAATCAGTTACATAATGTTAGTTGCTCAAATCTTTCACTTTTCCATGTTAGAAAACCTCAAATTTATGCGCCATTTTCGACCAACGTATCTTCTAAATTCTCGATTCGTTTGGGTTCACACTTCCAACAAAAATACAGTAGCTTCAAGTCCAAGCTGCCTCTCAAATGTGCATCGCTGAACACTTCGGATTCCGTGCTACCTGATCCAATCCCTCAGAAAATGAAGCAAAAAACAATGTCCATTTTGGAGATTCTGAAGCAAGCAAATTCACTTCTACCTTATGTAGTCTTCGCTAGCACACTTCTAGCTCTAATCTTCCCACATTCTTTTACGTGGTTTACCAGCAGATACTATGCTCCTGCATTAGGATTTTTGATGTTTGCAGTTGGAGTTAATTCAAGTGAAAAGGACTTCCTTGAAGCATTTAACAGGCCAGCAGAACTTGTGACTGCTTATGTTGGTCAGTTTGTGGTGAAGCCTCTTCTTGGATATTTTCTTTGCATAATTTCAGTAAATGTATTTGGTCTACCAACAGCAATAGGCGCAGGAATTGTATTGCTGGCTTGTGTTAGCGGAGCGCAGCTCTCAAGTTATGCTACTTTTCTATCAGACCCACAAATGGCACCATTAAGCATAGTTATGACATCGTTATCTACTATTTCTGCGGTTTTTGTCACACCTCTCTTATTATTGTTGCTCATTGGGAAGAAACTGCCTATAGATGTAAAAGGAATGGTGTTTAGCATTACACAGGTTGTGCTTGTTCCTATTACATTTGGTCTACTTCTAAATCGCTTCTTTCCTCATATTTGTAATGCTATTCGACCATTTTTGCCTCCACTATCAGTATTGGTAGCAGCTCTCTCTGCAGGAGCACCACTTGCTCTTAACATTGAGTCAGTTAAATCCCCCTTTGGTTTTGCTATCTTTTTGCTCGCTGTTGCTTTTCATTTGTCATCTTTTGTAGCTGGTTATGTTCTTAGTGGATTCGTCTTTCGTTATTCTCCTGATGTGAAGCCGCTGCAGAGAACAATTTCCTTTGAGACAGGAATGCAAAGTAGCCTCCTTGCCCTAGCTCTTGCTAATAAATTCTTTGAAGATCCAGTTGTGGGTATGCCATCTGCAATTTCTTCTCCGCTTATGTCTTTGATGGGATTCTCTCTTGTTCTGATTTGGTCGAAAATAAAGAACAAGACAAAACAAGGCAGCTGA 1236 0.3981 MYSISCRVNQLHNVSCSNLSLFHVRKPQIYAPFSTNVSSKFSIRLGSHFQQKYSSFKSKLPLKCASLNTSDSVLPDPIPQKMKQKTMSILEILKQANSLLPYVVFASTLLALIFPHSFTWFTSRYYAPALGFLMFAVGVNSSEKDFLEAFNRPAELVTAYVGQFVVKPLLGYFLCIISVNVFGLPTAIGAGIVLLACVSGAQLSSYATFLSDPQMAPLSIVMTSLSTISAVFVTPLLLLLLIGKKLPIDVKGMVFSITQVVLVPITFGLLLNRFFPHICNAIRPFLPPLSVLVAALSAGAPLALNIESVKSPFGFAIFLLAVAFHLSSFVAGYVLSGFVFRYSPDVKPLQRTISFETGMQSSLLALALANKFFEDPVVGMPSAISSPLMSLMGFSLVLIWSKIKNKTKQGS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3816 411 Gene3D - 84 403 IPR038770 -
Tpr2g3816 411 PANTHER SODIUM-BILE ACID COTRANSPORTER 49 405 IPR004710 -
Tpr2g3816 411 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS6, CHLOROPLASTIC-RELATED 49 405 - -
Tpr2g3816 411 Pfam Sodium Bile acid symporter family 128 310 IPR002657 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3816 Tpr-Chr2 41010509 41014191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3816 1 407 Organic Solute Cotransporters AT4G22840 59.179 4.51e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3816 - - mtr:MTR_5g011450 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3816 2 41010509 41014191 Tpr2g3816 2 41010509 41014191 ECH