Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3812 ATGTCATCAACATGTAGCTCAAACCATAAAACTAACCAACCACCTTCACCTTCTCCACAGTTACAAACCCGAAAATGTGATGCGGATCAAACAAAGACTCCTCTATTGGAGGAGTTAAAAGTTCAAGGAAGTTTGGCCTTTCCAATGGTGTTGATGAATTTAGCTTGGTTTGCGAAGACAGCTATAACAACGGCGTTTTTGGGTCGACTCGGTGAGCTCAGCTTAGCCGGTGGCGCGCTCGGGTTCACTTTTGCCAATGTTACCGGTTTTTCTGTTTTGAATGGTCTATGTGGTGCCATGGAACCTATTTGTGGACAGGCTCATGGAGCTAAAAACATAAGGCTCCTTCACAAGACTCTTCTCATGACAATTTTATTGTTGCTATTGGTAACAATTCCTATTACTTTTATGTGGCTTTACATTGGTAAAATTTTGATTCATTTTGGCCAACAACAAGAGATTTCTACTGTGGCTGGAACCTATGTTTTTTATCTCATACCTGATTTGTTTGTTATGTCACTCTTGTGTCCCTTAAAAGCTTACTTGAGTTCTCAAAGCATCACTCTTCCTACCATGTTTAGTTCTGGTGTAGCACTTGCTGTTCATATTCCTGTTAACATACTACTCTCAAAAACCATGGGTCTAAAAGGGGTTTCCATGGCTGTTTGGATAACTGATCTTATTGTTGTGGTTCTTCTTGCCATTTATGTTGTAATTCTGGATAATCGAAAGGGAACGGCGTGGAAGGAAGGAGGATGGTGGGACCAGAGTATTATGGATTGGATTAGGCTAATCAAGCTTAGTGGATCTTGTTGCCTCAACACATGTATGGAGTGGTGGTGCTATGAGATTCTAGTCTTGCTTACTGGCCACCTCGCAAACGCCAAGCAAGCGCTCGGAGTTTTAACTATTGTGTTAAACTTCGACTATTTGCTTTTCTCGGTAATGTTGTCACTGGCCACTTGTGTTTCCACCCGTGTCTCGAATGAGCTTGGTGCAAACCAAGCTAGCCGTGCTTACCGATCTGCACGCATGTCTCTGGGAATAGGTTTTATCGCTGGTTGTACTGGCAGCTTGGCGATGGTGGCTGCAAGGGGAATTTGGGGGCAACTTTTCAGCCATGACAGGGGCATTATAAATGGAGTAAAAAAGACAATGTTGTTGATGGCTCTAGTGGAATTGTTTAATTTTCCACTGGCAGTTTGTGGAGGGATAATTCGAGGGACGGCTCGGCCTTGGTTAGGTATGTATGCAAATCTAGGTGGGTTTTATTTCTTGGCTCTGCCCCTTGGTGTTGTTTTTGCCTTCAAGCTTCGTCTTGGCCTTGTTGGACTCTTCTTTGGACTTCTTACTGGTATTGTAGCTTGCTTGTCGCTATTATTAATATTTATTGCTAGGATTAAGTGGGTGGAAGAAGCTGCCAAGGCACAAATACTAGCAAGTAACGACCAAATTAAGGAAGTTCCCTATAATGATGCGGAAGTACAAATTGAGGCTCGTGAAAATGACAAAGTATAA 1518 0.4269 MSSTCSSNHKTNQPPSPSPQLQTRKCDADQTKTPLLEELKVQGSLAFPMVLMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNIRLLHKTLLMTILLLLLVTIPITFMWLYIGKILIHFGQQQEISTVAGTYVFYLIPDLFVMSLLCPLKAYLSSQSITLPTMFSSGVALAVHIPVNILLSKTMGLKGVSMAVWITDLIVVVLLAIYVVILDNRKGTAWKEGGWWDQSIMDWIRLIKLSGSCCLNTCMEWWCYEILVLLTGHLANAKQALGVLTIVLNFDYLLFSVMLSLATCVSTRVSNELGANQASRAYRSARMSLGIGFIAGCTGSLAMVAARGIWGQLFSHDRGIINGVKKTMLLMALVELFNFPLAVCGGIIRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVACLSLLLIFIARIKWVEEAAKAQILASNDQIKEVPYNDAEVQIEARENDKV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3812 505 MobiDBLite consensus disorder prediction 1 24 - -
Tpr2g3812 505 CDD MATE_eukaryotic 38 475 IPR045069 GO:0042910|GO:1990961
Tpr2g3812 505 PANTHER PROTEIN DETOXIFICATION 56 28 485 - -
Tpr2g3812 505 TIGRFAM matE: MATE efflux family protein 48 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g3812 505 Pfam MatE 48 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g3812 505 Pfam MatE 271 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g3812 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3812 Tpr-Chr2 40969253 40971011 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3812 K03327 - gmx:100804083 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3812 2 40969253 40971011 Tpr2g3812 2 40969253 40971011 ECH