Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3811 ATGGAAATAGCTGCTACGCACTACCATTGCTGTTCAAGCTTGCTTTTGCGTTCAGACTCCTCGCTTCGTTTGGTTCATAATTTGAAGCTAACAAATCCTAAAAATTCATGGCTAGGAACCAAAATTAGGGTTAAACCGTGCAGTGTCAGTGTAAATCCCGCCATATCCGTTTTCCACCGCCGTCCATTGGCTTCCACCGTTTCCTTCAGTCTCGCTACCTCAAATCCAGATAGTGTTTCATCAAGTCGGGAATTTGTCAAACATCCAGAGGGTGTTCCACCAGGTCAGGAAATCCCCAGATGGTCTTCTTCTGCTATAAAAGCGATTGCATTGGCTCAAGTGGAAGCCAGAAAACTCAAGCGTCTTACTACTGGCACTGAAACCCTTATCTTGGGGGTTCTTGTTGAGGGTACTAATCTGGCTAACACGTTTTTGCGAGCCAATGGAATTACACTTTTCAAGGTGAAAGATGAAATGGAGAAACTACTTGGAGAAGCTGATAGGTTTGCAACACCCGGTACGCGTCCTCATATAACTGATGATGCTCAGAGGGCTCTTGATTGGGCTGTTAATAAAAAAATAAAATCAGGTGAAAGCGGGGAGGTAACCCCAACACACATAATTCTTGGCATTTGGTATGAAGTGGATTCCCCTGGTCACAAGATACTATCCAACCTTGGCATTAATGAAGAAAAAGCTAAAGAGCTAGAAGCCTCAATTTCTAAATCTGTTGTTATTGATGTATGA 747 0.4324 MEIAATHYHCCSSLLLRSDSSLRLVHNLKLTNPKNSWLGTKIRVKPCSVSVNPAISVFHRRPLASTVSFSLATSNPDSVSSSREFVKHPEGVPPGQEIPRWSSSAIKAIALAQVEARKLKRLTTGTETLILGVLVEGTNLANTFLRANGITLFKVKDEMEKLLGEADRFATPGTRPHITDDAQRALDWAVNKKIKSGESGEVTPTHIILGIWYEVDSPGHKILSNLGINEEKAKELEASISKSVVIDV* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3811 248 Gene3D - 100 247 IPR036628 -
Tpr2g3811 248 ProSiteProfiles Clp repeat (R) domain profile. 98 243 IPR004176 -
Tpr2g3811 248 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 9 247 IPR044217 -
Tpr2g3811 248 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT2, CHLOROPLASTIC 9 247 - -
Tpr2g3811 248 Pfam Clp amino terminal domain, pathogenicity island component 200 238 IPR004176 -
Tpr2g3811 248 Pfam Clp amino terminal domain, pathogenicity island component 112 164 IPR004176 -
Tpr2g3811 248 SUPERFAMILY Double Clp-N motif 100 234 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3811 Tpr-Chr2 40964026 40969170 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3811 - - cam:101488253 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3811 2 40964026 40969170 Tpr2g3811 2 40964026 40969170 ECH