Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3810 ATGGAGTGGCCTGCTTGTACGGATGAATATGAAAAGCTCTTAATAAGGATGAGCACTCCCAGGGTTGTTATTGACAATGCCGTGTGCTCCACTGCAACTTTGGTCAAGGTTATTAGCACAAGAAGACATGGTAGTTTACTTGATGCAATACAAGTTCTCATTGATCTTAATCTTGTAATTAAGAAGGCCTATATATCTTCTGATGGCAAATGGTTCATGGATGTTTTCCATGTCACTCATCAAAATGGAAGCAAGCTTATTGAAGAGAGCGTTTTAAAATATATAGAACAGTCACTCGGGAGCATTCACAATGTGAGAACTAGTTGCACAAACGGTCTTACTACGCTTGAATTATCAGGAACCGATAGAATTGGTCTTCTATCGGAGGTGTTTGCTGTACTTGCTGATCTTCAATGCGATGTGGTTGAGGCTAAGGTTTGGACTCACAATGGTCGCATTGCCTCTTTGATCTACGTTAAAGACTGCAATTCTGGAACCACTATTGAGGATTCTCAGAAAATTAAAAAGATTGAAGTGCGTTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAGACTACTATCTCTATGTCTGTTATGCATAGTGAAAGAAGGTTGCATCAAATGATGTTCGCGGATCGTGACTACGAGAGGACTCCCATTCTCAAGCTTACTTCCGATAACACTGTAGTGACGGTCCAGAATTGGGCAGAAAGGGGCTATTCGGTTGTCAATGTTCAGTGTAAGGATCGAATCAAACTATTATTTGATGTCGTGTGCAATTTGACAGACATGGAGTATGTCGTGTTTCATGCAACCATCAACACGAATAGTAACCAAGCTTACTTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAACCGGAGCGGCAACGTGTAATTCAGTGTTTAAAAGCTTCTGTCGAGAGAAGGGCGTCTGAGGGTGTTCAACTAGAGTTATGCACCAAAGACAAGAAAGGACTTCTAGCAGAAGTGATGAGAACCTTTCGCGAGAACGGGCTTAATGTTACAAGGGCTGAGATATCAACTGTAGATAACATGGCAACAAATGTTTTCTATGTAACAGATGTGATTGGAAATCCAGCTGATCCAAAAATCATAGAGTCTGTTCGGCAGAAAATCGGGTCAAACAATTTAGAAGTGAAGGAGTTACCATTGATTTATCATCAAAAGGCAGAGAGTGAGGATCAAGCTGTTGGAATTGGGGGGGCAGTGTTGTGGTCTATTGGGAACCTTGTGAGAAGGAATTTGTACAGTTTGGGATTAATTAAATCATGTTCTTAA 1326 0.4057 MEWPACTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVISTRRHGSLLDAIQVLIDLNLVIKKAYISSDGKWFMDVFHVTHQNGSKLIEESVLKYIEQSLGSIHNVRTSCTNGLTTLELSGTDRIGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGTTIEDSQKIKKIEVRLRNVLKGDNDIRSAKTTISMSVMHSERRLHQMMFADRDYERTPILKLTSDNTVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKDGTPISSEPERQRVIQCLKASVERRASEGVQLELCTKDKKGLLAEVMRTFRENGLNVTRAEISTVDNMATNVFYVTDVIGNPADPKIIESVRQKIGSNNLEVKELPLIYHQKAESEDQAVGIGGAVLWSIGNLVRRNLYSLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3810 441 Pfam ACT domain 114 163 IPR002912 -
Tpr2g3810 441 Pfam ACT domain 325 375 IPR002912 -
Tpr2g3810 441 SUPERFAMILY ACT-like 29 102 IPR045865 -
Tpr2g3810 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Tpr2g3810 441 SUPERFAMILY ACT-like 320 388 IPR045865 -
Tpr2g3810 441 CDD ACT_ACR_3 244 318 - -
Tpr2g3810 441 CDD ACT_ACR_4 322 393 - -
Tpr2g3810 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Tpr2g3810 441 CDD ACT_ACR_2 114 187 - -
Tpr2g3810 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Tpr2g3810 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Tpr2g3810 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Tpr2g3810 441 Gene3D - 322 392 - -
Tpr2g3810 441 Gene3D - 110 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3810 Tpr-Chr2 40948569 40951753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3810 - - lja:Lj2g3v2002690.1 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3810 2 40948569 40951753 Tpr2g3810 2 40948569 40951753 ECH