Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3806 ATGTTAGCAAGCTACCTCTCCGACGACGATTCCCAAATCATGGCTTCAACACCGTCGCCTCCAATGTCGCCGCCGGTAAACGCAGGTCGCATTCGAACCTTAAAAGAAGGTTCTGGAAAAACAGGTCCCGTCGTGTACTGGATGTTCAGAGATCAACGGTTGAAAGACAATTGGGCTCTCATCCACGCCGTTCATCAAGCCAACAAATCCAATGTTCCCGTTGCCGTTGTTTTCAATCTCTTCGATCACTTTCTCGGTGCAAAGTCTCGTCAATTAGGGTTTATGCTTAAGGGTTTGCGTCAATTGTGTCACCAACTTCAATACACGCTTCAAATACCCTTTTTCTTGTTTCAGGGTGAGGCAGAGGAAACTGTATCGAAATTTGTTAGAGAATGTGGAGCTTCACTTTTGGTGACAGACATGTCACCTTTAAGAGAAGTGAAGAAATGCAAAGCTGAGATTTGTGAGAGGGTTAGCGATTTGGTTACAGTTCATGAAGTTGATGCTCACAACATTGTGCCTCTTTGGGTAGCTTCTGAGAAATTGGAGTACAGTGCTAGAACAATAAGGGGAAAGATAAACAAAAAGCTTTCTGATTATCTTGTTGATTTTCCGAATGTTGAATCACCAACTATGAAATGGGGTAGCACCGAGGATCACGCCATAGACTGGGATGAAATCATTGCTCAAGTGTTAAGGAGTGGAGCTGAGGTTCCTGAAGTTAATTGGTGTGAGCCTGGAGAAAGTGCTGCTATGGAAGTATTGATGGGAAGTAAAAATGGATTCTTGACTAAAAGGTTGGGAAGTTATTCCACAGATCGCAATAACCCTTGTAAACCAACCGCACTTTCTGGTTTATCTCCCTATTTGCATTTTGGACAGATATCTGCTCAAAGATGCGCGTTAGAAGCTCGTAAACTACGAGCTTCATATCCTCAAGCGGTTGATACTTTCTTGGAGGAGTTGATTGTGCGGAGAGAACTTGCCGATAACTTTTGCTACTATCAGCCTCATTATGATTCATTACAAGGAGCATGGGAATGGGCTCGTAAGACCTTACTCGATCACGCGTCTGATAAGCGACAACATAATTACACGAGGGAGCAATTGGAGAAGGCACAAACTGCTGATCCTCTCTGGAATGCTTCTCAACTGGAGATGGTTCACTATGGGAAAATGCATGGTTTTATGAGAATGTATTGGGCGAAGAAGATACTTGAATGGACAAGAGGACCTGAGGAAGCACTTGAGATATGTATATATTTAAATGATAAGTATGAAATGGATGGGAGGGATCCAAGTGGTTATGTTGGCTGTATGTGGTCTATATGTGGGGTACACGATCAGGGTTGGCGAGAGCGTCCCATTTTTGGGAAAATTCGATACATGAATTATGAAGGGTGCAAAAGAAAATTTGATGTTGACAGATACATTGCATATGTTAATAAATTAGTTGGCGAACTGAGGAAGAGAAAGGCTGAAAATTTGCCGTCACAAAAGGAGAAAGTACTCCGCCATTGTAATCCCGAGGATTGA 1536 0.4284 MLASYLSDDDSQIMASTPSPPMSPPVNAGRIRTLKEGSGKTGPVVYWMFRDQRLKDNWALIHAVHQANKSNVPVAVVFNLFDHFLGAKSRQLGFMLKGLRQLCHQLQYTLQIPFFLFQGEAEETVSKFVRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNIVPLWVASEKLEYSARTIRGKINKKLSDYLVDFPNVESPTMKWGSTEDHAIDWDEIIAQVLRSGAEVPEVNWCEPGESAAMEVLMGSKNGFLTKRLGSYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLRASYPQAVDTFLEELIVRRELADNFCYYQPHYDSLQGAWEWARKTLLDHASDKRQHNYTREQLEKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEMDGRDPSGYVGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVDRYIAYVNKLVGELRKRKAENLPSQKEKVLRHCNPED* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3806 511 Gene3D - 170 341 - -
Tpr2g3806 511 TIGRFAM phr2: deoxyribodipyrimidine photolyase 26 480 IPR008148 GO:0003904|GO:0006281
Tpr2g3806 511 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 26 505 - -
Tpr2g3806 511 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 43 214 IPR036155 -
Tpr2g3806 511 Pfam DNA photolyase 44 206 IPR006050 -
Tpr2g3806 511 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 235 490 IPR036134 -
Tpr2g3806 511 MobiDBLite consensus disorder prediction 1 26 - -
Tpr2g3806 511 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 342 492 - -
Tpr2g3806 511 Gene3D HUPs 24 169 IPR014729 -
Tpr2g3806 511 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 42 175 IPR006050 -
Tpr2g3806 511 ProSitePatterns DNA photolyases class 2 signature 2. 445 464 IPR032673 -
Tpr2g3806 511 ProSitePatterns DNA photolyases class 2 signature 1. 318 332 IPR032673 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3806 K01669 - gmx:100170749 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3806 2 40920906 40924646 Tpr2g3806 2 40920906 40924646 ECH