Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3798 ATGGATAACATAAGCATATTACCATCAACCCCAGGAAAATTAAAACCAGAAAAATACTACCAACCTTATAATAATAATAATAATAATTACTATATTCATCGCATTAGATTATCAAAACTTACACTATGGTCTTCAATTTTCCTAGCTTTCATTATTTTCTTTTTCATTCTCTCACCTTCCCCTTCCCCAAATTCAATTCGGACCCATAACCCATGGGGCGGACCCGATTGGGAAAAACGGGTCACCAAATCCGCCCGACGCAGCTCCGCTTCATCTCTCACCGTACTCGTCACCGGTGCTTCCGGTTTCGTCGGTACTCACGTCTCACTCGCGCTTAAACGACGTGGAGACGGTGTTCTAGGTCTTGATAATTTCAACCGCTACTATGACCCGAATCTCAAACGCGCTCGTCAGAAATTACTCTCACGCGCCGGTGTTTTCGTCGTTGAAGGTGATATCAACGATGAAAAACTTCTTCAAAAACTCTTCGATGTTGTTCCATTTACACACGTTATGCATCTTGCTGCTCAAGCTGGTGTTCGTTACGCAATGCAAAACCCTAATTCTTATATTCATAGTAACATTGCAGGTTTTGTTAATCTTCTAGAAGCTTCTAAATCGGCGAATCCTCAACCGTCGATTGTTTACGCTTCATCGAGTTCAGTTTACGGATTGAATTCGAAAGTTCCTTTCTCCGAAAAGGATCGAACGGATCAACCTGCTAGTCTTTATGCAGCTACAAAAAAAGCTGGTGAAGAAATTGCACATGTTTATAATCATATCTATGGTCTTTCTATAACTGGGTTGCGTTTTTTCACTGTTTACGGTCCTTGGGGAAGACCTGATATGGCTTATTTCTTCTTTACAAAAGATATTTTGAAAAGGAAACAGATTACTGTGTTTGAATCACCTGATGGTGGAAGTGTTGCTAGAGATTTTACATATATTGATGATATTGTGAAAGGTTGTTTAGGGGCATTGGATACTGCTAAGAAGAGTACTGGTGTCGGTGGGAACAAGAAGAAAGGGAATGCACAGTTTAGGATTTTTAATTTGGGTAATACTTCGCCGGTTCCGGTTACTGAACTTGTTGATATATTGGAGAGGCTTTTGAAAGTGAAGGTGAAAAGGAAGGTGATGCCGATGCCGAGAAATGGTGATGTTAGGTTTACTCATGCTAATATAAGTAAAGCACAAAGGGAGCTTGGTTACATGCCTACTACTGATTTGGAGACTGGACTCAACAAGTTTGTGAGGTGGTATCTTGACTTTTACAATCCTTTAAAGAACAAGAGTGTTTGGTGA 1305 0.4031 MDNISILPSTPGKLKPEKYYQPYNNNNNNYYIHRIRLSKLTLWSSIFLAFIIFFFILSPSPSPNSIRTHNPWGGPDWEKRVTKSARRSSASSLTVLVTGASGFVGTHVSLALKRRGDGVLGLDNFNRYYDPNLKRARQKLLSRAGVFVVEGDINDEKLLQKLFDVVPFTHVMHLAAQAGVRYAMQNPNSYIHSNIAGFVNLLEASKSANPQPSIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHVYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKRKQITVFESPDGGSVARDFTYIDDIVKGCLGALDTAKKSTGVGGNKKKGNAQFRIFNLGNTSPVPVTELVDILERLLKVKVKRKVMPMPRNGDVRFTHANISKAQRELGYMPTTDLETGLNKFVRWYLDFYNPLKNKSVW* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3798 434 Gene3D - 93 426 - -
Tpr2g3798 434 PRINTS Nucleotide sugar epimerase signature 121 137 - -
Tpr2g3798 434 PRINTS Nucleotide sugar epimerase signature 311 326 - -
Tpr2g3798 434 PRINTS Nucleotide sugar epimerase signature 347 362 - -
Tpr2g3798 434 PRINTS Nucleotide sugar epimerase signature 387 404 - -
Tpr2g3798 434 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 3 432 - -
Tpr2g3798 434 PANTHER EPIMERASE-RELATED 3 432 - -
Tpr2g3798 434 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 428 IPR036291 -
Tpr2g3798 434 Pfam NAD dependent epimerase/dehydratase family 95 332 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3798 Tpr-Chr2 40871099 40872787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3798 1 426 Miscellaneous Gene Families AT4G00110 73.165 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3798 K08679 - gmx:100803127 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3798 2 40871099 40872787 Tpr2g3798 2 40871099 40872787 ECH