Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3777 ATGGCTTCTCCCCTGTTTCTACTCTGTTTCATACTCTGTTTTTCACTATCATCACAAATGATTCTATTACCATTAACACACTCAATTTCCAAAACCCAATTCAACACTACCCACCATCTCCTCAAATCAACCTCAACCCGTTCCTCCAACCGCTTCCGCCACCAACACCACCACCGCAAACACCAAACACAAGTTTCTCTCCCACTTTCACCAGGAAGTGATTACACACTTTCCTTCAACCTAGGTTCAAATCCACCACAACTCATAACTCTCTACATGGACACAGGTAGTGACCTTGTTTGGTTCCCATGTTCACCTTTCGAATGTATCCTCTGTGAAGGAAAACCACAAACAACAAAACCAGCAAACATCACAAAACAAGCACACTCTGTTTCTTGTCAATCCCCTGCATGTTCTTCAGCACATTCAACTATGTCTTCTAGTAATCTTTGTGCTATTTCTCGTTGTCCTTTAGACTTCATTGAAACTTCTGATTGTTCTAATTTTTCTTGTCCACCATTTTACTATGCTTATGGCGACGGAAGTTTCGTAGCTAATCTCTATCGTCATACACTTTCTCTTTCTTCTCTTCATCTTCAAAATTTCACTTTTGGTTGTGCTCACACTGCACTTGCTGAACCCACCGGCGTAGCCGGTTTCGGCCGTGGAATTCTTTCTCTTCCGGCTCAGCTCTCTACTCTTTCACCTCATTTGGGTAATCGTTTTTCTTATTGTTTAGTATCTCATTCTTTCGACGGTGACCGAGTTCGTCGACCGAGTCCACTCATTCTCGGCCGTCACGACGATACCACCACCGCCGGAGAAGCTGTTGAGTTTGTCTACACTTCAATGCTTTCAAACCCAAAGCATCCTTATTACTACTGTGTGGGACTCGCCGGAATAACAGTCGGAAAGAAAATGGTACCGGCGCCGGAGATTCTCAAAAGGATCGACGGTAAAGGTAACGGAGGAATGGTTGTTGATTCTGGAACAACGTTTACGATGTTGCCGGAGAGTTTTTATAACGCGGTGGTTACTGAGTTCGATAAACGAGTTGGACGAGTTAACAAACGAGCGAGTGAAGTTGAAACTAAAACGGGTCTCGGGCCGTGTTATTACTTAAACGGGTTATCACAAATACCAATGATGACGTTGCATTTTGTTGGGAATAATTCGGGTGTGGTGTTGCCTAGGAAGAATTACTTTTATGAATTTTTGGACGGTAGTGATGGTGCTAGAAAGAAAAGTAAAGTGGGGTGTATGATGTTGATGAACGGTGGAGATGAAACTGAGTTAGATGGTGGACCTGGAGCTACTTTAGGGAATTATCAACAACAAGGGTTTGAGGTTGTTTATGATTTGGGGAAAGAGCGCGTGGGTTTCGCGAAGAAAGAGTGCGCGTTGCTTTGGGATAGTCTTAACAGTGTAAAAAACTGA 1437 0.4342 MASPLFLLCFILCFSLSSQMILLPLTHSISKTQFNTTHHLLKSTSTRSSNRFRHQHHHRKHQTQVSLPLSPGSDYTLSFNLGSNPPQLITLYMDTGSDLVWFPCSPFECILCEGKPQTTKPANITKQAHSVSCQSPACSSAHSTMSSSNLCAISRCPLDFIETSDCSNFSCPPFYYAYGDGSFVANLYRHTLSLSSLHLQNFTFGCAHTALAEPTGVAGFGRGILSLPAQLSTLSPHLGNRFSYCLVSHSFDGDRVRRPSPLILGRHDDTTTAGEAVEFVYTSMLSNPKHPYYYCVGLAGITVGKKMVPAPEILKRIDGKGNGGMVVDSGTTFTMLPESFYNAVVTEFDKRVGRVNKRASEVETKTGLGPCYYLNGLSQIPMMTLHFVGNNSGVVLPRKNYFYEFLDGSDGARKKSKVGCMMLMNGGDETELDGGPGATLGNYQQQGFEVVYDLGKERVGFAKKECALLWDSLNSVKN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3777 478 SUPERFAMILY Acid proteases 70 471 IPR021109 -
Tpr2g3777 478 Gene3D Acid Proteases 270 469 IPR021109 -
Tpr2g3777 478 ProSiteProfiles Peptidase family A1 domain profile. 75 462 IPR033121 -
Tpr2g3777 478 MobiDBLite consensus disorder prediction 45 65 - -
Tpr2g3777 478 Pfam Xylanase inhibitor C-terminal 294 462 IPR032799 -
Tpr2g3777 478 MobiDBLite consensus disorder prediction 49 63 - -
Tpr2g3777 478 CDD pepsin_A_like_plant 75 466 IPR034161 -
Tpr2g3777 478 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 475 - -
Tpr2g3777 478 Gene3D Acid Proteases 55 265 IPR021109 -
Tpr2g3777 478 PANTHER ASPARTYL PROTEASES 4 475 IPR001461 GO:0004190|GO:0006508
Tpr2g3777 478 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 325 336 IPR001969 GO:0004190|GO:0006508
Tpr2g3777 478 Pfam Xylanase inhibitor N-terminal 75 249 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3777 Tpr-Chr2 40716424 40718388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3777 57 469 Miscellaneous Gene Families AT1G77480 25.740 3.42e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3777 - - gmx:100807884 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3777 2 40716424 40718388 Tpr2g3777 2 40716424 40718388 ECH
Tpr2g3777 2 40716424 40718388 Tpr5g2649 5 48665065 48666760 PCT