Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3614 ATGGGTAATGAATATCATTCTTTACACATATTTTTCTTTCCTTTTCTTGCTCATGGTCATATCATACCAACAGTTGATATGGCCAAATTATTTGCAGAAAAAGGTGTCAAAGCCACTATAATTACTACACTCCTAAATGAACCCTTTATCTCCAAGTCTATAGAAAAATCCATAATTAGTGGCCACAATATTCACATTCAAACTATAAACTTCCCTTGCATAGAGGCTGGTTTACCAAATGGTTGTGAAAATATTGACTCAGTCTCAGTCCCTTCACATGAATTTTTTTCTACATTCTTAAAAGCCACAAATTTGTTACAAGAGCCACTTGAGGAACTACTACATGAACAACAACCAGATTGTATTGTTGCTGACATGTTTTTCCCATGGACAACTGATTCTGCTGCCAAATTTGGTATTCCTAGACTTGTGTTTCATGGGATTTCATACTTCTCGTTATGTGCTACCGAGTGTATGAGACTCTATGAGCCTTTCAAGAATGTTTCTCCTGATTCCGAACCCATTGTTATTCCTAATCTCCCTGGTGATATTAAAATCACAAGGCTACAGACTCCGCCTATTGAGGATTCGAAGGAATTTGAAGGAATGGTCAGATTAATGCAAGATATAAAGGAATCAGAACTGAAGAGCTTTGGAGTTGTTGTTAACAGCTTCTATGATCTTGAAAATGATTATGCAGATTATTACATAAATGTACTTGGAAGAAAATCATGGCATATTGGTCCTTTGTGTCTTTACAATAGGGATATGGAAGAAAAAGTAAATAGAGGAAAAACAGCTTTTGATCATGATATGTGCTTAAAATGGCTTGACATGAAGAAATCCAATTCAGTTGTTTACATATGCTTTGGAAGTATAGCAAACTTTCCTAACTCTCAACTTCAAGAAATTGCTATAGGACTTGAGGCATCAGGACAAAATTTCATTTGGGTAGTGAGGAAAAGTAAAGAAGATGAAGAAGAATGGTTACCTGAAGGATTTGAGAAAAGAATGGAGGGAAAGGGACTGATTATTAGAGGTTGGGCACCTCAAGTGTTGATTCTTGAACATGAAGCAATTGGGGCATTTGTGACTCATTGCGGATGGAATTCGGTATTAGAAGGAGTAACTGCAGGGGTGCCTATGGTTACTTGGCCTGTTGCGGCGGAGCAATTTTACAATGAGAAGTTGGTGAATGAGGTACTTCAAATTGGTGTACCTGTTGGTGTTAAAAAATGGGTTGGATTTGTTGGGGATAGTGTTGAAAGGGATGCTATAGAGAAGGTTGTGAAGAGGATTATGGAAGGGGAAGGAACAAAGGAAATGAGGAATAAGGTGAAAGTGTTATCAGAGTTAGCAAAAAGGGCAATGAAAAAAGAAGGATCATCTTATTCAAATTTGAATGATTTAATAGGGGAGTTGGGATTGATTAGGAATTGA 1440 0.3701 MGNEYHSLHIFFFPFLAHGHIIPTVDMAKLFAEKGVKATIITTLLNEPFISKSIEKSIISGHNIHIQTINFPCIEAGLPNGCENIDSVSVPSHEFFSTFLKATNLLQEPLEELLHEQQPDCIVADMFFPWTTDSAAKFGIPRLVFHGISYFSLCATECMRLYEPFKNVSPDSEPIVIPNLPGDIKITRLQTPPIEDSKEFEGMVRLMQDIKESELKSFGVVVNSFYDLENDYADYYINVLGRKSWHIGPLCLYNRDMEEKVNRGKTAFDHDMCLKWLDMKKSNSVVYICFGSIANFPNSQLQEIAIGLEASGQNFIWVVRKSKEDEEEWLPEGFEKRMEGKGLIIRGWAPQVLILEHEAIGAFVTHCGWNSVLEGVTAGVPMVTWPVAAEQFYNEKLVNEVLQIGVPVGVKKWVGFVGDSVERDAIEKVVKRIMEGEGTKEMRNKVKVLSELAKRAMKKEGSSYSNLNDLIGELGLIRN* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3614 479 PANTHER GLYCOSYLTRANSFERASE 6 474 - -
Tpr2g3614 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 473 - -
Tpr2g3614 479 Gene3D Glycogen Phosphorylase B; 275 458 - -
Tpr2g3614 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 400 IPR002213 GO:0008194
Tpr2g3614 479 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Tpr2g3614 479 Gene3D Glycogen Phosphorylase B; 6 274 - -
Tpr2g3614 479 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 6 474 - -
Tpr2g3614 479 CDD GT1_Gtf-like 8 474 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3614 Tpr-Chr2 39212270 39213944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3614 8 474 Glycosyltransferase AT2G15490 52.521 1.36e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3614 K23260 - gmx:100818708 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3614 2 39212270 39213944 Tpr2g3614 2 39212270 39213944 ECH