Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3605 ATGGAGATCGCTCACGAACCACCGCCTTCTCTCGACGGAACCCCTATCCCTGCCAATACCCTCGCCAACTCTCCCTCTTCTTCTTATCCATCCTCTTCCGCTTCGTCTCCTCGTCTTTCCAAGGGAAAGGAGATCATCGAAACCTCCACATCGACGGCGCCGCCGCCATCTGCAAGGTACGACGATGATGACGAAGATGAAGAAGATGTTTGCCGAATATGCCGGAACCCTGGTGACGCTGATAATCCTCTTCGGTATCCGTGTGCCTGTAGCGGTAGTATCAAATTTGTGCATCAAGATTGTCTCCTTCAGTGGCTTAATCATAGCAACGCTCGTCAATGCGAGGTCTGCAAGCATCCATTCTCCTTCTCTCCTGTTTATGCAGAGAATGCACCTGCTAGGTTGCCTTTTCAAGAGTTTGTGGTTGGAATGGCGATGAAAGCTTGCCATGTCTTGCAATTCTTTTTGCGTCTGAGTTTTGTGCTATCTGTGTGGCTCTTGATTATACCTTTCATAACATTTTGGATATGGCGTTTAGCTTTTGTGAGGAGTTTGGGTGAAGCTCAGAGGTTATTCTTAAGCCATTTATCAACTGCAGTTATTCTGACTGATTGCCTCCATGGCTTCCTACTTTCTGCAAGCATTGTCTTCATTTTTCTTGGGGCCACTTCTTTGAGAGATTACTTTAGGCATTTGCGAGAAATTGGGGGGCAGGATGCTGATAGAGAAGATGAAGTGGACAGAAATGGTGCTCGAATTGCTAGAAGGCCTGCTGGGCAAGCTAATCGTAATGTTAATGGTGATGCAAATGGAGAAGATGCTGGTGGAGCACAAGGAGTTGCAGGAGCAGGTCAAGTAATTAGAAGAAATGCTGAAAATGTTGCTGCTCGATGGGAGATGCAAGCAGCACGTCTTGAGGCTCATGTTGAACAGATGTTTGATGGTCTGGATGACGCTGATGGAGCAGAAGATGTACCCTTTGATGAACTTGTTGGCATGCAGGGTCCAGTTTTTCATTTGGTTGAAAATGCATTTACTGTGCTTGCAAGCAATATGATTTTCCTTGGGGTTGTAATATTTGTGCCCTTCTCATTAGGCCGCATCATTCTTCATTATCTATCGTGGTTCTTTTCAACTGGTAGTGGTCCTGTGTTATCAGTGGTCCCACCTACAGATACTTCTCTTTCCCTTGCAAATATTACATTGAAAAATGCATTAACAGCTGTTCAAAATATATCAACTGATACTCAAGAAAGTGGATCAATTGGTCAGATTGCAGAAATGCTAAAAGTGAATGCAAGTGATTTGAGTGAAATGTCAAACAACATAAGTGCATCTGTTTCAACTGATCTCTTGAATGGAGGGTCAATTGGAACTTCCAGGATTTCTGATGTTACTACTCTGGCTATTGGATATATTTTCATATTGACTCTAATTTTCTGCTACTTCGGTGTTGTTGCGTTAATTCGTTACACAAAGGGCGAACCTTTGACTACCGGAAGATTTTATGGTATTGCTTCTATAGCAGAGACAATTCCATCTCTCTTCAGACAGTTTTTAGCAGCAATGAGGCATTTGATGACCATGGTAAAGGTTGCTTTCCTATTAGTTATTGAACTAGGGGTATTTCCCCTCATGTGTGGGTGGTGGCTCGATGTTTGTACTATACAGATGTTCGGGAAGACAATGGCTCACAGAGTTCAGTTCTTCTCTGCATCTCCTTTAGCGAGCTCATTGGTTCATTGGGTCGTAGGGATCGTGTACATGCTACAAATTAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGGAACGGGGTTTTGTACTTCCTTCGGGATCCCGCTGATCCAAACTATAATCCATTCCGTGATCTGATAGATGATCCTGTGCACAAACATGCTCGCAGGGTTTTGTTATCTGTTGCTGTTTATGGGAGTTTGATTGTTATGCTGGTATTTTTGCCAGTTAAACTTGCAATGCGGATGGCTCCTTCCATTTTTCCACTTGAAATACTGCTATCTGATCCCTTCACCGAAATTCCAGCTAACATGCTTCTCTTTCAGATCTGTATACCATTTGCTATTGAACATTTTAAATTGAGGACAACTATTAAATCCCTACTTCGTTATTGGTTTACGGCAGTTGGTTGGGCACTTGGTTTAACTGATTTCTTACTGCCTAGTCCTGATGACAATGGTAATCAAGAAAATGGGAATGGGGAACGAGGTAGGCAGGAAAGATTACAGATTGCACAAGCAGGGGTACACGATCAGGGTATAGTTCCATTTGCAGGCGATGATTTGAACAGAGTCACTAATGCAGATGCTGGAGAGGATTATGACAATGATGAACAATCTGATTCTGACAGTTACGCCTTCGTACTTCGCATTGTTCTTTTATTGGTCATTGCTTGGATGACTCTACTTATTTTCAACTCTGCCCTGGTAGTTGTACCAATATCACTGGGAAGAATACTTTTCAATTCCATTCCTCGTCTGCCTATAACTCATGGCATTAAGTGCAACGATCTGTATGCCTTCATCATTGGAAGTTATGTTATCTGGACTGCTGTTGCCGGAGTTAGATACTCAATCGAGCAAGTTAGAAAAAGGAGGACTTCAGTTTTGTTGAACCAGATCTGGAAGTGGTGTAGCATTGTTGTCAAGAGTTCTGCACTTTTGTCTATATGGATATTTGTCATACCAGTGCTAATTGGGCTTCTCTTTGAGCTTTTAGTCATTGTGCCAATGAGAGTTCCGGTGGATGAAAGTCCAGTATTCCTCCTTTATCAAGACTGGGCATTAGGCCTTATATTTCTCAAAATATGGACTAGATTGGTTATGTTGGACCACATGATGCCTCTAATGGATGAAAGTTGGCGAGTAAAGTTTGAGAGGGTGAGAGAGGATGGTTTCTCCAGGCTGCAAGGTCTTTGGGTCCTTCGGGAGATTGTACTTCCAATCATAATGAAACTATTGACAGCATTATGTGTACCTTATGTTTTGGCGAGAGGTATGTTTCCAGCGCTTGGGTACCCATTGGTGGTCAATTCTGCTGTCTATCGATTTGCATGGTTAGGATGCCTCTCTTTCAGTTTCGTGTGCTTCTGTGCCAAGAGATTTCACGTCTGGTTCACAAATCTCCACAATTCAATACGTGATGACCGATATCTTATTGGCCGGAGGTTGCATAACTTTGGAGAACATGTTGAGAAGGCAAACGAAGCAGCAACTTCTACAGGAGTGCAGGATACTATTTTACTGGATTCAAATTTAAATCAACAAGATCGTGATGCAGATGTTGGTTTACGGTTGAGGCACATCAATCAACAGGCGGGCTGA 3342 0.43 MEIAHEPPPSLDGTPIPANTLANSPSSSYPSSSASSPRLSKGKEIIETSTSTAPPPSARYDDDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSLGEAQRLFLSHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDADREDEVDRNGARIARRPAGQANRNVNGDANGEDAGGAQGVAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRIILHYLSWFFSTGSGPVLSVVPPTDTSLSLANITLKNALTAVQNISTDTQESGSIGQIAEMLKVNASDLSEMSNNISASVSTDLLNGGSIGTSRISDVTTLAIGYIFILTLIFCYFGVVALIRYTKGEPLTTGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMAHRVQFFSASPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLEILLSDPFTEIPANMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPSPDDNGNQENGNGERGRQERLQIAQAGVHDQGIVPFAGDDLNRVTNADAGEDYDNDEQSDSDSYAFVLRIVLLLVIAWMTLLIFNSALVVVPISLGRILFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGVRYSIEQVRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLMDESWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGMFPALGYPLVVNSAVYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVEKANEAATSTGVQDTILLDSNLNQQDRDADVGLRLRHINQQAG* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3605 1113 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 129 IPR013083 -
Tpr2g3605 1113 Pfam RING-variant domain 71 117 IPR011016 GO:0008270
Tpr2g3605 1113 PANTHER ZINC FINGER, RING-CH-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 59 1056 - -
Tpr2g3605 1113 PANTHER SSM4 PROTEIN 59 1056 - -
Tpr2g3605 1113 CDD RING_CH-C4HC3_MARCH6 70 119 - -
Tpr2g3605 1113 SUPERFAMILY RING/U-box 66 122 - -
Tpr2g3605 1113 ProSiteProfiles Zinc finger RING-CH-type profile. 63 124 IPR011016 GO:0008270
Tpr2g3605 1113 SMART ringv_2 70 118 IPR011016 GO:0008270
Tpr2g3605 1113 MobiDBLite consensus disorder prediction 1 64 - -
Tpr2g3605 1113 MobiDBLite consensus disorder prediction 16 56 - -
Tpr2g3605 1113 Coils Coil 288 308 - -
Tpr2g3605 1113 MobiDBLite consensus disorder prediction 246 273 - -
Tpr2g3605 1113 ProSiteProfiles Zinc finger RING-type profile. 71 118 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3605 Tpr-Chr2 39151902 39158530 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3605 K10661 - gmx:100813205 1961.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3605 2 39151902 39158530 Tpr2g3605 2 39151902 39158530 ECH