Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3590 ATGTTTGGATTAATCAGAAGAAAAACAAATTGGGTATCTTCTTCCAATTTGCTATTAAGAAGAGAGTTGTGTTTGGGTGCTAATGGAGGAGGAGGAGGAGGAGGAGGAGCCATGGAACACTTGATCAATCAACTCCAATCTCATGTCCATAAGGTCCTTGCTGGTGGTGGACCCGAATCTGTCAAGAGAAATAGTAGTAGAAACAAACTTCTACCTAGACAAAGAATTGATCTTCTTCTTGATCCTGGTTCTTCTTTCCTTGAGCTTTCACAGCTTGCAGGACATGAGTTGTATGAAGAGCCTTTACCTTCTGGTGGGGTTGTGACTGGCATTGGTCCGGTGCACGGCCGACTTTGCATGTTTGTGGCCAATGATCCTACTGTTAAGGGAGGGACTTATTATCCTATTACTGTTAAGAAACATCTCAGGGCACAGGAGATTGCTGCTCAATGCAAATTGCCGTGCGTGTATCTTGTTGACAGTGGCGGTGCTTTCCTTCCCAAGCAGGCTGATGTATTTCCGGACAGAGAAAACTTTGGTAGAATATTTTATAATCAGGCTATAATGTCTTCTCAGGGGATTCCCCAAATTGCATTGGTGTTAGGCTCTTGCACTGCTGGTGGTGCCTATATACCTGCTATGGCTGATGAAAGTGTGATGGTCAAGGGAAATGGCACTATTTTTTTAGCAGGGCCACCTCTTGTTAAGGCTGCCACTGGAGAAGAAGTGTCTGCAGAGGATTTGGGAGGTGCTGCCGTGCACTGCAAGACATCGGGTGTTTCTGACTATTTTGCTCAAGATGAACTTCATGCACTTGCACTTGGGAGAGACATTGTTAAGAATTTGCATATGGCTGGGAGAGATGCCTCGACAAATGGATTGCTAAATATGAATTATGAATATAAAGAGCCACTATATGATGTCAATGAACTTCGTTCTATTGCCCCCACTGATCTTAAGCAGCCGTTTGATATCCGAGAAGTAATTTCTCGCGTTGTTGACGGAAGTGAATTTGATGAATTCAAGAAACTGTATGGCACTACTCTTGTAACAGGTTTTGCTAGGATTTTTGGACAGCCTGTAGGAATTATTGGAAACAATGGGATTTTATTCAATGAATCTGCTCTGAAAGGGGCCCATTTCATTGAACTATGTACTCAACGTAACATTCCCTTGGTTTTCCTTCAGAACATCACTGGATTCATGGTGGGATCAAAGTCCGAAGCAAATGGTATAGCAAAGTCTGGAGCAAAAATGGTGATGGCTGTATCTTGTGCAAAGGTACCTAAAATCACGATAATTGTTGGCGGAAGCTTTGGTGCTGGAAACTATGCAATGTGTGGTCGTGCCTATAGTCCAAACTTCATGTTCCTTTGGCCTAATGCCAGAATATCTGTCATGGGAGGTGCTCAGGCTGCTGGTGTTCTGGCTCAAATAGAGAAAGGCAATAAGAAAAAACAAGGAATTCAGTGGAACAAGGAGGAAGAGGAAAAGTTCAAAGCAAAAGTAGTCGATGCGTACGAGAGAGAAGGAAGTCCTTATTACTCAACGGCGAGGCTTTGGGATGATGGAATCATTGATCCAGCTGATACAAGAAAAATCATCGGTCTCTGTGTCTCTGCTTCCTTGAACCGTGCCACAGAAAATACCAAATATGGTGTATTTAGAATGTGA 1674 0.4319 MFGLIRRKTNWVSSSNLLLRRELCLGANGGGGGGGGAMEHLINQLQSHVHKVLAGGGPESVKRNSSRNKLLPRQRIDLLLDPGSSFLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQAIMSSQGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGAAVHCKTSGVSDYFAQDELHALALGRDIVKNLHMAGRDASTNGLLNMNYEYKEPLYDVNELRSIAPTDLKQPFDIREVISRVVDGSEFDEFKKLYGTTLVTGFARIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSKSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLAQIEKGNKKKQGIQWNKEEEEKFKAKVVDAYEREGSPYYSTARLWDDGIIDPADTRKIIGLCVSASLNRATENTKYGVFRM* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3590 557 SUPERFAMILY ClpP/crotonase 38 280 IPR029045 -
Tpr2g3590 557 Pfam Carboxyl transferase domain 64 547 IPR034733 -
Tpr2g3590 557 Gene3D - 35 286 - -
Tpr2g3590 557 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 37 557 IPR045190 -
Tpr2g3590 557 Gene3D - 297 557 - -
Tpr2g3590 557 SUPERFAMILY ClpP/crotonase 294 557 IPR029045 -
Tpr2g3590 557 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 38 294 IPR011762 -
Tpr2g3590 557 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 303 549 IPR011763 GO:0016874
Tpr2g3590 557 PANTHER BNAA03G50840D PROTEIN 37 557 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3590 37 557 Acyl Lipid Metabolism Gene Families AT4G34030 81.190 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3590 K01969 - gmx:100777651 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3590 2 39038198 39042589 Tpr2g3590 2 39038198 39042589 ECH