Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3580 ATGGTGCTAGCATCACCAAAACCAATTAGGAATGAAACAATTTTACCAAGTGATGTTATTCCTATAGTGGACCTTAAAGGTGAAAGGTGTGAAGTAATAAAACAAATTGTGAAAGCAAGTGAAGAGTATGGTTTTTTTAAGGTGATAAACCATGGTATTAGTGATGAAACTATTGATAAAATGGAAGAAGCAGGATTTAATTTCTTTGCAAAACCAATGAGTCAAAAGAAACAAGCTTCACCTGCTTATGGTTGTAAGAACATAGGATTTAATGGTGACATTGGTGAGGTTGAGTATCTTCTTCTCAATGCTAATACTTCTTCTATTGCTCAAATATCCAAAACTATTTCCAATGATGATCCTAACTTCAGGTATAGAGTGAGTTCATATACAGAAGCAGTGAAAGAGGTGGCATGTGAGATACTAGAGTTAATGGCAGAGGGTTTGGGGGTCCCTGATACAAAGGTATTCAGCAGTTTAATAAAGGATATTGAAAGTGACTCAGTTCTTAGGCTAAATCACTACCCACCTAAGGACAAGTCACATTCCAACAATGTTGGCTTTGGGGAGCATTCTGACCCTCAGATTTTGACCATTCTTAGATCTAATGACGTTTCTGGTCTTCAAATCTCTCTTCAACATGGTCTCTGGATTCCTGTTAACCCTGACCCCTCTGCTCTCTGTGTTAATGTAGGTGATGTCCTTGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACATAGGGCAATGACAAACTCATACAAAACTAGAATGTCAATGGCATATTTTGGGGCTCCACCTCTAAATGCTTCCATTGTTGCTCCACCAGTTTTGGTTACACCTCACAGGCCCTCTCTCTTCAGAACATTTACTTGGGCCGATTACAAAAAAGCTACTTACTCTCTAAGACTTGGTGACACTAGAATTCAACTTTTTAGAGCAAACATGTCATGA 957 0.3845 MVLASPKPIRNETILPSDVIPIVDLKGERCEVIKQIVKASEEYGFFKVINHGISDETIDKMEEAGFNFFAKPMSQKKQASPAYGCKNIGFNGDIGEVEYLLLNANTSSIAQISKTISNDDPNFRYRVSSYTEAVKEVACEILELMAEGLGVPDTKVFSSLIKDIESDSVLRLNHYPPKDKSHSNNVGFGEHSDPQILTILRSNDVSGLQISLQHGLWIPVNPDPSALCVNVGDVLEVMTNGRFVSVRHRAMTNSYKTRMSMAYFGAPPLNASIVAPPVLVTPHRPSLFRTFTWADYKKATYSLRLGDTRIQLFRANMS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3580 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 315 - -
Tpr2g3580 318 Pfam 2OG-Fe(II) oxygenase superfamily 167 265 IPR044861 -
Tpr2g3580 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 79 IPR026992 -
Tpr2g3580 318 Gene3D - 4 304 IPR027443 -
Tpr2g3580 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 267 IPR005123 -
Tpr2g3580 318 SUPERFAMILY Clavaminate synthase-like 15 307 - -
Tpr2g3580 318 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3580 Tpr-Chr2 38974428 38978227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3580 20 314 Glycosyltransferase AT5G59530 27.358 6.88e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3580 K04125 - gmx:100783917 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3580 2 38974428 38978227 Tpr2g3580 2 38974428 38978227 ECH