Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3448 ATGGAAGGTGACACATACTCCACCTTTGGCAATGGCACCCAAATTGATGGCAAGATCTTCCAAACATTTCAAAAAAGCTTTGTTCAAGTGCAAAACATTTTGGATCAGAATCGTGTACTTATCAATGAGATAAACCAGAATCATGAATCTAAGGTCCCTGACAACCTCAACAGGAATGTTGGTCTTATTAAGGAGCTTAACAACAACATAACAAGAGTTGCTCAACTTTATTCAGATCTTTCAACTTCCTTCACCAAATCTATTCATGTTTCTTCTGAAGGAGATTCAACTGCTGCTGTTAAATCTCAAGAAAAATTCAGTCACAAACGACACAGACCTGATCTTTAA 348 0.3707 MEGDTYSTFGNGTQIDGKIFQTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNRNVGLIKELNNNITRVAQLYSDLSTSFTKSIHVSSEGDSTAAVKSQEKFSHKRHRPDL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3448 115 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Tpr2g3448 115 PANTHER PROTEIN ELF4-LIKE 4 1 113 IPR040462 GO:0042753
Tpr2g3448 115 MobiDBLite consensus disorder prediction 92 115 - -
Tpr2g3448 115 PANTHER PROTEIN ELF4-LIKE 3 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3448 Tpr-Chr2 37881399 37884357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3448 - - ccaj:109808760 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3448 2 37881399 37884357 Tpr2g3448 2 37881399 37884357 ECH
Tpr2g3448 2 37881399 37884357 Tpr5g0818 5 14595826 14598352 PCT