Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3447 ATGGCTTCAACTTCCATAATTTCAATGTCTGTGCCAGTAACCTGTGCCTCTAGCAAGAAGATAGAGGCACCAATCTCTCAAGCATTCTTGAAGGCACCATTGACTTTGAAACCATCAAAGTCCAACACAAGGTTTCAATTTCAAGTGAAAGCTTCTCTGAAAGAGAAAGTTGTGACAGGTCTTACCGCAGCTGCATTAACAGCTTCAATGATTGTTCCTGATGTTGCTGAAGCTGCTACTGTTTCACCTTCTCTCAAGAATTTCTTACTCAGTATCGTTTCTGGTGGTGTTGTTGTTGCTGCCATTCTTGGTGCTGTTATTGCTGTTTCCAATTTCGACCCTGTCAAGCGAACCTGA 357 0.4258 MASTSIISMSVPVTCASSKKIEAPISQAFLKAPLTLKPSKSNTRFQFQVKASLKEKVVTGLTAAALTASMIVPDVAEAATVSPSLKNFLLSIVSGGVVVAAILGAVIAVSNFDPVKRT* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3447 118 PANTHER EXPRESSED PROTEIN 1 118 - -
Tpr2g3447 118 Gene3D Single helix bin 80 118 - -
Tpr2g3447 118 Pfam Photosystem II reaction centre X protein (PsbX) 81 117 IPR009518 GO:0009523|GO:0015979|GO:0016020
Tpr2g3447 118 PANTHER OS07G0673550 PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3447 Tpr-Chr2 37875007 37875656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3447 - - gmx:100792794 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3447 2 37875007 37875656 Tpr2g3447 2 37875007 37875656 ECH
Tpr2g3447 2 37875007 37875656 Tpr5g0815 5 14565288 14566037 PCT