Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3415 ATGACTAAAACTTACCCTTTTTTCATCAATTTCATACTACTACTACTATTAACCACAGCCCATTTAAAATCCACCGTACAAAAATCAGATCAATGCAAAACTCTGGTACCACCAGAGCTAGCAAATTTAGACACTATATCCAATAAACTCCATAATGACCCTAAAACCATCAAAATTGCTTCCAATGACTATGGAAACATAATTCAAGAATTTCCAATAGCAGTATTTCATCCATCTTCAATACAAGACATAATAACCTTAATTAAAATCTCAAACAATAGCTCTGTTCCTTTCACTATAGCAGCCAGAGGACAAGGTCACTCTACTAATGGACAATCAATGGCACGTGATGGAGTTGTAGTTGACATGGCTAGCTTCAGAAAACAAAGAAAAGGGATTGCAATTAGTGTCTCTGAAGACCCTTTGATTGGTTACTATGTTGATGTTGGAGGAGAACAACTATGGATTGATGTTTTGTATGAAACACTTGAATATGGAGTTGCACCAGTTTCTTGGACTGATTATCTTTATCTGACGGTTGGAGGAACACTTTCCAATGCTGGAATTAGTGGTCAGACGTTTAGATATGGTCCTCAAATCACTAATGTTCTTGAACTGGATGTGATTACAGGAAAAGGAGACTATGTAAAGTGCTCTAATGAGAAGAATTCAGAGTTATTTAACGCGGTTCTTGGAGGTTTAGGACAATTTGGAGTTATAACAAGGGCAAGGATTTCTCTTCAGCCAGCTCCCACAATGGTTAAGTGGATCAGATTGCTTTATAGTGATTTCTCTGCTTTTACCAAAGATCAGGAACGATTAATCTTAATGAAAGGAAGCAAACAAAATAGTGAATTGGATTTTTTGGAAGGGATGCTGCTAATGCAACAAGGGTCCATAAATAATTGGAGATCCTCTAATTTCTTCCCTCTATCTGATCATTCAAGAATAGCTTCTTTAATAAATAAACACAGCATTCTCTACTGTCTTGAATTGGTTAAATATTACGATCATCAATCTGAGGAAATGGTCGACAAGGAAATTCAAGTTATGCTTCAAGGACTAGCCTATATCCCTGGACTTTATTATGAGAAAAATGTGCCATATGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAGCTTCAATCACAAGGACTATGGGATGTTCCTCACCCATGGCTCAATTTATTTGTACCAAAATCTCAAATCTTGGAATTTAATTCTGGCGTATTCAAGGATATAATTCTTAAAAGAAACATCACCAATGGAATTGTTTTGGTTTACCCCATGAATAAAAGCAAGTGGGATGATAGAATGTCAACAATTACACCAAATGAGGATATCTTCTATGCAGTTGGATTTTTACACTCAAGTGGATTTAATAATTGGAAAGAATATGAAGCTCAAAACAAAGAAATTTTGGAGTTTTGTAGTCATGTTGGCATTAAAGTTAAGCAATATCTTCCCAACTACAGCACACAGGAAGATTGGGAAAATCATTTTGGCAATAAATGGATGAGATTCTTGGAAAGAAAACATCAATTTGATCCTAGAATGATTCTATCACCTGGACAAAAAATCTTCAACAATAACTATAACCAGCAGCAGTATATATGA 1623 0.3555 MTKTYPFFINFILLLLLTTAHLKSTVQKSDQCKTLVPPELANLDTISNKLHNDPKTIKIASNDYGNIIQEFPIAVFHPSSIQDIITLIKISNNSSVPFTIAARGQGHSTNGQSMARDGVVVDMASFRKQRKGIAISVSEDPLIGYYVDVGGEQLWIDVLYETLEYGVAPVSWTDYLYLTVGGTLSNAGISGQTFRYGPQITNVLELDVITGKGDYVKCSNEKNSELFNAVLGGLGQFGVITRARISLQPAPTMVKWIRLLYSDFSAFTKDQERLILMKGSKQNSELDFLEGMLLMQQGSINNWRSSNFFPLSDHSRIASLINKHSILYCLELVKYYDHQSEEMVDKEIQVMLQGLAYIPGLYYEKNVPYVEFLNRVRSGELKLQSQGLWDVPHPWLNLFVPKSQILEFNSGVFKDIILKRNITNGIVLVYPMNKSKWDDRMSTITPNEDIFYAVGFLHSSGFNNWKEYEAQNKEILEFCSHVGIKVKQYLPNYSTQEDWENHFGNKWMRFLERKHQFDPRMILSPGQKIFNNNYNQQQYI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3415 540 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 251 530 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tpr2g3415 540 SUPERFAMILY FAD-linked oxidases, C-terminal domain 251 531 IPR016164 GO:0003824|GO:0050660
Tpr2g3415 540 PANTHER GULONOLACTONE OXIDASE 12 531 - -
Tpr2g3415 540 SUPERFAMILY FAD-binding/transporter-associated domain-like 48 249 IPR036318 GO:0050660
Tpr2g3415 540 Gene3D - 253 489 IPR016170 -
Tpr2g3415 540 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 72 107 IPR006093 GO:0016491
Tpr2g3415 540 ProSiteProfiles PCMH-type FAD-binding domain profile. 68 250 IPR016166 GO:0071949
Tpr2g3415 540 Gene3D - 123 252 IPR016169 -
Tpr2g3415 540 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 12 531 - -
Tpr2g3415 540 Gene3D - 53 530 IPR016167 -
Tpr2g3415 540 Pfam FAD binding domain 72 219 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3415 Tpr-Chr2 37631824 37637498 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3415 K00279 - gmx:100787676 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3415 2 37631824 37637498 Tpr2g3415 2 37631824 37637498 ECH
Tpr2g3415 2 37631824 37637498 Tpr5g0751 5 12853456 12860305 PCT