Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2890 ATGAGTTTAGTAGCTGAAACCAAGAAGCCACATGCTCTTCTGATCCCATTTCCAACACAAGGTCACATAAATCCATTTCTCAAACTAGCAAAGATCCTTCACAACAAAGGCTTCTACATAACATTTGTCAACACTGAATTCAACCACAAACGTTTGCTTAAGTCCATAGGTCCTAATATTGTCAATGGTTTGTCAGATTTCAACTTTGAGACTATCCCAGATGGTCTCCCTCCCACAGACATGGATGCAACTCAAAACATTCCTGATCTTTGTGATTCTACAAGAAACCACTGTTTGGCACCTTTTTGTGATCTCATATCAAAACTCAATGATCCTCCAGTTACTTGCATAATCTCAGATGGTGTTATGTCTTTCACAATTAAAGCTTCTCAGCAATTTGGGTTGCCTAATATTCTCTTTTGGGCTCATAGTGCTTGTGTTTTCATGGTTTACAAAGAATGCAAGAATCTCATGGAAAGGGTCCTGGCACCACTTAAAGATGCCAGTTATCTCACAAATGAACATTTAGACACCATCATAGACTGGATCCCTGGCATGAAGAACATTACTTTAAGAGACCTTCCAGGCATATTTCACACAACAGATCCAAATGATTTACTATTGAACTTTGTGGCAGAACAAGTTGAAGTAGCTTCAAAAGCTTCTGCTATTATTCTACCAACTTTTGATGCCTTGGAATCTGATGTGTTAAATGAACTCTCCACAATGTTTCCTAAACTCTACACAATAGGTCCACTTGAGTTGTTCCATGACCAAATTTCAGAAAATAATGGATTTGAATCTATAAAATGTAATTTATGGAAAGAAGAAAGTGAGTGTCTCAAATGGCTTGATTCACAGGAACCAAATTCTGTTCTCTATGTGAATTTTGGTAGTGTTATAAACATGAGGCATAATCAACTTGTTGAATTGGCTTGGGGATTAGCAAATAGCAAGAAAAAATTCTTGTGGGTGATTAGGCCTGATATAGTTAAGGATGGAAGTGAAACATTACTTGTGCCACAAGAAATTGTAGAAGAAACCAAAGATAGAGGACTAATGGTAGGTTGGTGTCCACAAGAGAAAGTTCTAAAGCACAAAGCAGTTGGAGGATTTTTGAGTCATTGTGGTTGGAATTCAACAATTGAAAGTATAAGCAATGGTGTGCCTTTGATTTGTTGTCCATTTTTCAATGACCAAATTCTCAATTGCAAGTATATTTGTAGTGAATGGAAATTTGGAATGGTGATGGATAGTGATAATGTAACAAGAGATGAAGTGGAGAAGCTTGTGGTAGAGTTGATAGAAGGTGAAAAGGGTAAGGGGATAAGGAGAAAAGCAATTGAGTGGAAGAAAATGGCAATAGAAGCAACCAATGTTGATGGTTCATCTTCTTTGAATTTGGAAAAATTGGTAACTGAATTGCTGCTATTCAAGAGTTAA 1443 0.3694 MSLVAETKKPHALLIPFPTQGHINPFLKLAKILHNKGFYITFVNTEFNHKRLLKSIGPNIVNGLSDFNFETIPDGLPPTDMDATQNIPDLCDSTRNHCLAPFCDLISKLNDPPVTCIISDGVMSFTIKASQQFGLPNILFWAHSACVFMVYKECKNLMERVLAPLKDASYLTNEHLDTIIDWIPGMKNITLRDLPGIFHTTDPNDLLLNFVAEQVEVASKASAIILPTFDALESDVLNELSTMFPKLYTIGPLELFHDQISENNGFESIKCNLWKEESECLKWLDSQEPNSVLYVNFGSVINMRHNQLVELAWGLANSKKKFLWVIRPDIVKDGSETLLVPQEIVEETKDRGLMVGWCPQEKVLKHKAVGGFLSHCGWNSTIESISNGVPLICCPFFNDQILNCKYICSEWKFGMVMDSDNVTRDEVEKLVVELIEGEKGKGIRRKAIEWKKMAIEATNVDGSSSLNLEKLVTELLLFKS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2890 480 CDD GT1_Gtf-like 10 467 IPR002213 GO:0008194
Tpr2g2890 480 ProSitePatterns UDP-glycosyltransferases signature. 357 400 IPR035595 -
Tpr2g2890 480 Gene3D Glycogen Phosphorylase B; 11 462 - -
Tpr2g2890 480 Gene3D Glycogen Phosphorylase B; 275 456 - -
Tpr2g2890 480 PANTHER PUTATIVE-RELATED 7 475 - -
Tpr2g2890 480 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 475 - -
Tpr2g2890 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 473 - -
Tpr2g2890 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 270 439 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2890 Tpr-Chr2 33404301 33406915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2890 3 477 Glycosyltransferase AT1G22340 52.183 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2890 - - gmx:100813330 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2890 2 33404301 33406915 Tpr2g2890 2 33404301 33406915 ECH