Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2516 ATGGCGGTTGAATATACATGTTGTGGAACAGAGTTTTTCATAAGAATTGTGATAATTGTTTTGCTTGTTGTGTTTGCTGGATTGATGTCAGGGCTTACTTTAGGTCTCATGTCTTTGAGTCTTGTTGATCTTGAAGTTCTTGCTAAATCTGGTACCCCTCAGGATAAGAAACATGCTGAGAAAATATTGCCTGTTGTAAGAAATCAACATTTACTGCTTTGCACTCTTCTAATTTGCAATGCTGCAGCTATGGAGGCACTTCCAATTTTTCTTGATAGTCTTGTTGTTGCTTGGGGTGCTATCCTAATTTCTGTTACATTAATTCTTCTGTTTGGTGAGATTATTCCTCAATCAGTTTGTTCTCGGTATGGTTTAACGATCGGTGCAACAGTCGCTCCAGCTGTTCGTGTTCTTGTATGGATATGTCTTCCTGTTGCTTATCCAATTAGCAAGTTGTTGGATTATTTGTTGGGGCATCGACATGAAGCCCTTTTCCGCAGAGCCGAGTTGAAAACACTTGTAGATTTACATGGTAACGAGGCTGGAAAAGGTGGTGAACTAACACATGATGAAACAACTATCATTGCTGGGGCACTTGAACTCTCTGAGAAAACTGCTGGTGATGCCATGAGTCCTATAAATGAAATATTTTCCATTGATATTAATTCAAAACTTGATAGGGAATTGATGACTCTAATATTGGAGAAAGGACATAGTAGAGTCCCTGTTTATTATGAGGAGCCTACAAATATCATTGGACTTATCCTGATCAAGAATTTGTTAACTATTGACCCAGAAGAAGAAGTACCTGTGAAAAGTGTGACCATACGCAAAATACCAAGGGTTCCAGAAATGATGCCACTTTATGATATATTGAATGAATTCCAAAAGGGCCATAGTCACATGGCTGTTGTTGTGAGACATTTTGACAAGACAGGGCAACAAACTTCCAATATTAATGGCAGTGATTCAGTAAGAGATGTGAAGGTGACTATTGATGTGGAGAAGACTCCTCAACAAGAGAAAATGTTAAAAAACAAGATGCAACTTCATAAGAGGAAAAGCTTACCAAATGCAAGTAATTCAAGTATGAGTACTAGTTCTAGGAGCAAAAAATGGTCACAAAATATATACTCAGATATTTTGGAAATTGATGGAAATTCAATTCCAAAGCTACCTGAAAAAGAAGAAGCTGTTGGAATAATTACAATGGAAGATGTAATTGAAGAGCTTTTGCAGGAGGAAATCTTTGATGAGACAGATCATCAGTTTGAAGACTCATAA 1284 0.3738 MAVEYTCCGTEFFIRIVIIVLLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDKKHAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAILISVTLILLFGEIIPQSVCSRYGLTIGATVAPAVRVLVWICLPVAYPISKLLDYLLGHRHEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTAGDAMSPINEIFSIDINSKLDRELMTLILEKGHSRVPVYYEEPTNIIGLILIKNLLTIDPEEEVPVKSVTIRKIPRVPEMMPLYDILNEFQKGHSHMAVVVRHFDKTGQQTSNINGSDSVRDVKVTIDVEKTPQQEKMLKNKMQLHKRKSLPNASNSSMSTSSRSKKWSQNIYSDILEIDGNSIPKLPEKEEAVGIITMEDVIEELLQEEIFDETDHQFEDS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2516 427 Pfam Cyclin M transmembrane N-terminal domain 18 190 IPR002550 -
Tpr2g2516 427 CDD CBS_pair_CorC_HlyC_assoc 205 309 IPR044751 -
Tpr2g2516 427 SUPERFAMILY CBS-domain pair 194 413 IPR046342 -
Tpr2g2516 427 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Tpr2g2516 427 MobiDBLite consensus disorder prediction 345 371 - -
Tpr2g2516 427 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Tpr2g2516 427 Gene3D - 191 328 IPR046342 -
Tpr2g2516 427 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 427 IPR045095 GO:0010960
Tpr2g2516 427 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 427 - -
Tpr2g2516 427 MobiDBLite consensus disorder prediction 353 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2516 Tpr-Chr2 30041812 30045328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2516 K16302 - gmx:100795897 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1740 3 15402647 15411827 Tpr2g2516 2 30041812 30045328 PCT