Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2296 ATGCCTCCTCTTCCATCCTCCATCTCGGCGAGATCCGAATCATCTCCACGCCACATCGTCAATCACAGTATCTCCAACGGTGGCGATTGCAGCCGTAGAAGTCATCAGCAACAGCAATTAGTGGTTCCGACGGCGATTGACGTTAGGATCAACGACCTGGTTGGGAATGGAATATCAGGAATACTACAGAAATGGGTGAACTATGGTAGAGGTTGGAGGCATCGTTGGTTCGTGCTGCAAGATGGTGTTCTCTCTTATTACAAGATTCATGGACCTGATAAGATCGTAATCAATCCTGAAACCGAGAAGGGATTCAAGGTTATTGGTGATGAATCGATGCGTATAATCTCTCGCAACCGCAATTCTCACCACTCTCAACATCAGCGAAAGGCTTTCGGTGAAATCCACCTCAAGGTTTCAACTATTCGCGAGAGCAGATCCGATGATAAACGGTTTTCCATATTCACTGGGACAAAGACATTGCACTTGAAAGCAGAAACTCGTGAAGATCGAGTGGCATGGTTGGAGGCCTTGCATGCAGTCAAAGATATGTTTCCTCGGATGTCTATCAGTGAGCTGATGGCTCCGGTGGACAATTTGGCCTTTTCAACTGAAAAGCTAAGGCATCGGCTTATGCAAGAAGGTGTTAGTGAGGCAGCCATCCAGGATAGTGAGCAAATTATGAGAAGTGAGTATGCAGCTCTACAAAACCAGCTTTTGCTGCTTAAGCAAAAGCAGTTGGCACTAATTGACAATTTACGCCATTTGGAGACAGAGAAGGTTGACCTGGAAAATACTGTTGTTGATGAGAGCCAAAGAAAATGGAATGATCAAGAGGCTTCTTCCACAATGAGGCAGGAAAAGTTTGGTGAAATTGGTGCAAGTGGGTCTGACGATGATAATGAGAGAAATGACGTAGCAGAGGAAGAAACAGATGATGATGATGATGATGCCGCCTTTTTTGACACACGTGATTTTATATCATCATCCAGTTCTATTAAAAGTAAGACTTCATCCTTTTCTTCAGATGATGAAGGAATCTCTGTAGTTGGATCCGAGGGGGATATAGATCCTTCTATTAGATCTGTCGGGACCAACTACCCTCACGTTAAGCGACGTAATAAATTGCCTGAACCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCATTGATTAAGGATAATATTGGGAAGGATCTAACTAAAGTATGCCTCCCTGTTTATTTTAATGAACCTCTCTCCTCTCTTCAAAAATGCTGTGAAGAAATGGAGTACTCATATCTCCTTGACCGAGCTTATGAATGGGGAAGAAGAGGCAATACGCTTATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGATGGGAGAATTTGCAAACCCTTTAATCCATTACTGGGGGAGACATATGAGGCTGACTTTCCAGATAAAGGCTTTCATTTCATCTCAGAGAAGGTCAGTCACCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCAGATAGCAACTTAAAGAGCAAATTTTGGGGGCGATCAATTCAACTCGATCCTGTTGGTATTTTGACATTAGAATTTGATGATGGTGAAGTATTTCAGTGGAGCAAGGTTACTACATCAATATACAATCTCATTTTGGGAAAGCTTTATTCTGATCATTATGGTACAATGCGCATTCAGGGAAACAGAGAATACTCATGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGCAATCCTCACCAGGTTCAAGGTATTGTTCATGACAGAAATGGGAAAACATTGGCTACCTTAATTGGAAAGTGGGATGACAGCATGTATTATGTTAATGGAGACTATGGTGGAAAGGGAAAAGGTTATGAATCGTTGTCAGAAGCCCATATACTATGGAAGCGGAGCAAGCCTCCCAAATTTCCTACTAGATATAACTTAACTCGTTTTGCTATCACATTAAATGAACTTACCCCAGGATTAAAGGAAAAGCTGCCACCTACAGATTCTAGGTTAAGACCAGATCAGAGGTATTTGGAAAATGGGGAGTTTGAAAAGGCAAATTCAGAAAAACTACGGCTAGAGCAGCGACAACGGCAGGCTAGGAAGATGCAAGAGAGCGGTTGGGAACCACGATGGTTTGCTAGGGATAAAACAAGCGGTACCTACCGCTACATAGGAGGATATTGGGAGGCCCGACAACAAAGAAGTTGGAACTCCTGTCCTGATATTTTTGGTCATATTCCGTCTGATCATCGTTTAGAAGGTGAAAACAAACTGCGGAGGGTGTGA 2316 0.427 MPPLPSSISARSESSPRHIVNHSISNGGDCSRRSHQQQQLVVPTAIDVRINDLVGNGISGILQKWVNYGRGWRHRWFVLQDGVLSYYKIHGPDKIVINPETEKGFKVIGDESMRIISRNRNSHHSQHQRKAFGEIHLKVSTIRESRSDDKRFSIFTGTKTLHLKAETREDRVAWLEALHAVKDMFPRMSISELMAPVDNLAFSTEKLRHRLMQEGVSEAAIQDSEQIMRSEYAALQNQLLLLKQKQLALIDNLRHLETEKVDLENTVVDESQRKWNDQEASSTMRQEKFGEIGASGSDDDNERNDVAEEETDDDDDDAAFFDTRDFISSSSSIKSKTSSFSSDDEGISVVGSEGDIDPSIRSVGTNYPHVKRRNKLPEPVEKEKGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNTLMRILNVAAFAVSAYASTDGRICKPFNPLLGETYEADFPDKGFHFISEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYSDHYGTMRIQGNREYSCKLKFKEQSIIDRNPHQVQGIVHDRNGKTLATLIGKWDDSMYYVNGDYGGKGKGYESLSEAHILWKRSKPPKFPTRYNLTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEFEKANSEKLRLEQRQRQARKMQESGWEPRWFARDKTSGTYRYIGGYWEARQQRSWNSCPDIFGHIPSDHRLEGENKLRRV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2296 771 Gene3D - 56 185 IPR011993 -
Tpr2g2296 771 ProSiteProfiles PH domain profile. 55 183 IPR001849 -
Tpr2g2296 771 Gene3D - 684 751 - -
Tpr2g2296 771 Pfam Oxysterol-binding protein 387 741 IPR000648 GO:0008289
Tpr2g2296 771 MobiDBLite consensus disorder prediction 272 319 - -
Tpr2g2296 771 Coils Coil 692 712 - -
Tpr2g2296 771 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 12 760 IPR000648 GO:0008289
Tpr2g2296 771 SUPERFAMILY Oxysterol-binding protein-like 382 758 IPR037239 -
Tpr2g2296 771 SUPERFAMILY PH domain-like 58 183 - -
Tpr2g2296 771 Coils Coil 253 273 - -
Tpr2g2296 771 SMART PH_update 56 185 IPR001849 -
Tpr2g2296 771 Pfam Pleckstrin homology domain 64 179 - -
Tpr2g2296 771 MobiDBLite consensus disorder prediction 302 319 - -
Tpr2g2296 771 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 12 760 - -
Tpr2g2296 771 CDD PH_ORP_plant 58 190 - -
Tpr2g2296 771 Gene3D - 473 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2296 Tpr-Chr2 27522980 27532814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2296 K20456 - gmx:100812036 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2296 2 27522980 27532814 Tpr2g2296 2 27522980 27532814 ECH